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  5. Gb_38978

Gb_38978


Description : transcription factor (AS2/LOB)


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0002612 (SeedPlants) Phylogenetic Tree(s): OG_06_0002612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38978
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00187850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
AT1G06280 LBD2 LOB domain-containing protein 2 0.02 Archaeplastida
AT1G07900 LBD1 LOB domain-containing protein 1 0.03 Archaeplastida
AT1G16530 LBD3, ASL9 ASYMMETRIC LEAVES 2-like 9 0.04 Archaeplastida
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
AT2G28500 LBD11 LOB domain-containing protein 11 0.02 Archaeplastida
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.02 Archaeplastida
GSVIVT01003547001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01003548001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01016330001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01016332001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01016335001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01020353001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01024662001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01032415001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01032714001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
Gb_08465 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_10524 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_13424 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_16914 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_20676 No alias transcription factor (AS2/LOB) 0.08 Archaeplastida
Gb_40684 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_40767 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os11g01550.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os12g01550.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
MA_10434193g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_10434193g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434782g0020 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_88711g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Mp1g14500.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Pp3c19_19400V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.03 Archaeplastida
Solyc02g086480.1.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Solyc03g095940.1.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc06g005090.3.1 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
Solyc06g050950.3.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc12g010810.1.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e016785_P005 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 18 114
No external refs found!