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  5. AT3G04200

AT3G04200


Description : RmlC-like cupins superfamily protein


Gene families : OG0000034 (Archaeplastida) Phylogenetic Tree(s): OG0000034_tree ,
OG_05_0000016 (LandPlants) Phylogenetic Tree(s): OG_05_0000016_tree ,
OG_06_0000030 (SeedPlants) Phylogenetic Tree(s): OG_06_0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G04200
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00155350 evm_27.TU.AmTr_v1... Germin-like protein 5-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00089p00119480 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00089p00120230 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00089p00122070 evm_27.TU.AmTr_v1... Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
AT1G18970 GLP4 germin-like protein 4 0.03 Archaeplastida
AT5G38910 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT5G39110 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
AT5G39130 No alias RmlC-like cupins superfamily protein 0.03 Archaeplastida
GSVIVT01000065001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01000069001 No alias Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01013822001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
GSVIVT01016761001 No alias Auxin-binding protein ABP19a OS=Prunus persica 0.04 Archaeplastida
GSVIVT01021700001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01021705001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01030965001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.05 Archaeplastida
GSVIVT01030967001 No alias Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
GSVIVT01031079001 No alias Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana 0.09 Archaeplastida
GSVIVT01031082001 No alias Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_10685 No alias Putative germin-like protein 3-2 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Gb_17046 No alias Auxin-binding protein ABP19a OS=Prunus persica... 0.02 Archaeplastida
Gb_30305 No alias Germin-like protein subfamily 2 member 1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g48760.1 No alias Putative germin-like protein 3-4 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os03g48770.1 No alias Germin-like protein 3-5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os08g09080.1 No alias Germin-like protein 8-11 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10325916g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10339776g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_10345692g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c17_21150V3.1 No alias RmlC-like cupins superfamily protein 0.02 Archaeplastida
Pp3c17_21300V3.1 No alias RmlC-like cupins superfamily protein 0.02 Archaeplastida
Pp3c23_1399V3.1 No alias germin-like protein 5 0.02 Archaeplastida
Smo227274 No alias Germin-like protein 1-3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Smo89841 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g088275.1.1 No alias Germin-like protein 8-2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Solyc01g102380.5.1.1 No alias Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.02 Archaeplastida
Solyc09g090005.1.1 No alias Germin-like protein subfamily 1 member 7 OS=Arabidopsis... 0.05 Archaeplastida
Solyc10g078840.1.1 No alias Putative germin-like protein 2-3 OS=Oryza sativa subsp.... 0.06 Archaeplastida
Zm00001e006921_P001 No alias Germin-like protein 4-1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009685 gibberellin metabolic process IEP Neighborhood
BP GO:0009686 gibberellin biosynthetic process IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0016102 diterpenoid biosynthetic process IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
BP GO:0042446 hormone biosynthetic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0070542 response to fatty acid IEP Neighborhood
BP GO:0071396 cellular response to lipid IEP Neighborhood
BP GO:0071398 cellular response to fatty acid IEP Neighborhood
InterPro domains Description Start Stop
IPR006045 Cupin_1 66 213
No external refs found!