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  5. Gb_39487

Gb_39487


Description : Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana (sp|q9m9y8|crtso_arath : 162.0)


Gene families : OG0002780 (Archaeplastida) Phylogenetic Tree(s): OG0002780_tree ,
OG_05_0003783 (LandPlants) Phylogenetic Tree(s): OG_05_0003783_tree ,
OG_06_0007541 (SeedPlants) Phylogenetic Tree(s): OG_06_0007541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39487
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00187330 evm_27.TU.AmTr_v1... Prolycopene isomerase, chloroplastic OS=Daucus carota 0.02 Archaeplastida
Cpa|evm.model.tig00001258.10 No alias No description available 0.01 Archaeplastida
Cpa|evm.model.tig00020723.8 No alias No description available 0.02 Archaeplastida
Cre09.g407200 No alias Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.03 Archaeplastida
GSVIVT01023233001 No alias Prolycopene isomerase, chloroplastic OS=Daucus carota 0.03 Archaeplastida
LOC_Os03g62510.1 No alias Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.06 Archaeplastida
MA_10428345g0020 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Pp3c2_2830V3.1 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.06 Archaeplastida
Zm00001e011669_P002 No alias Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0034755 iron ion transmembrane transport IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!