Description : RNA editing factor (ORRM)
Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0003873 (LandPlants) Phylogenetic Tree(s): OG_05_0003873_tree ,
OG_06_0002371 (SeedPlants) Phylogenetic Tree(s): OG_06_0002371_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_39691 | |
Cluster | HCCA: Cluster_209 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G04280 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein with... | 0.03 | Archaeplastida | |
Cpa|evm.model.tig00000912.4 | No alias | No description available | 0.02 | Archaeplastida | |
Mp1g21200.1 | No alias | RNA editing factor (ORRM) | 0.05 | Archaeplastida | |
Solyc02g088790.3.1 | No alias | RNA editing factor (ORRM) | 0.06 | Archaeplastida | |
Solyc05g053780.4.1 | No alias | RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) | 0.04 | Archaeplastida | |
Solyc10g047130.2.1 | No alias | RNA chaperone (RZ1|GR-RBP) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
BP | GO:0006457 | protein folding | IEP | Neighborhood |
MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
MF | GO:0016859 | cis-trans isomerase activity | IEP | Neighborhood |
MF | GO:0030234 | enzyme regulator activity | IEP | Neighborhood |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
MF | GO:0042393 | histone binding | IEP | Neighborhood |
MF | GO:0042802 | identical protein binding | IEP | Neighborhood |
MF | GO:0042803 | protein homodimerization activity | IEP | Neighborhood |
CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
MF | GO:0051087 | chaperone binding | IEP | Neighborhood |
MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | Neighborhood |
MF | GO:0060590 | ATPase regulator activity | IEP | Neighborhood |
CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
MF | GO:0098772 | molecular function regulator | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 46 | 112 |
No external refs found! |