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  5. Gb_39691

Gb_39691


Description : RNA editing factor (ORRM)


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0003873 (LandPlants) Phylogenetic Tree(s): OG_05_0003873_tree ,
OG_06_0002371 (SeedPlants) Phylogenetic Tree(s): OG_06_0002371_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39691
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AT5G04280 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.03 Archaeplastida
Cpa|evm.model.tig00000912.4 No alias No description available 0.02 Archaeplastida
Mp1g21200.1 No alias RNA editing factor (ORRM) 0.05 Archaeplastida
Solyc02g088790.3.1 No alias RNA editing factor (ORRM) 0.06 Archaeplastida
Solyc05g053780.4.1 No alias RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.04 Archaeplastida
Solyc10g047130.2.1 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 46 112
No external refs found!