1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_39796

Gb_39796


Description : 3-hydroxy-3-methylglutaryl-CoA synthase


Gene families : OG0002042 (Archaeplastida) Phylogenetic Tree(s): OG0002042_tree ,
OG_05_0002447 (LandPlants) Phylogenetic Tree(s): OG_05_0002447_tree ,
OG_06_0002351 (SeedPlants) Phylogenetic Tree(s): OG_06_0002351_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39796
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00168650 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.mevalonate... 0.03 Archaeplastida
MA_101113g0020 No alias 3-hydroxy-3-methylglutaryl-CoA synthase 0.02 Archaeplastida
MA_261222g0010 No alias 3-hydroxy-3-methylglutaryl-CoA synthase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEA Interproscan
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013528 HMG_CoA_synth_N 5 178
IPR013746 HMG_CoA_synt_C_dom 302 504
IPR013746 HMG_CoA_synt_C_dom 179 301
No external refs found!