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  5. Gb_40122

Gb_40122


Description : NADPH-oxidase (Rboh)


Gene families : OG0000318 (Archaeplastida) Phylogenetic Tree(s): OG0000318_tree ,
OG_05_0000285 (LandPlants) Phylogenetic Tree(s): OG_05_0000285_tree ,
OG_06_0055331 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40122
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Smo235874 No alias Redox homeostasis.reactive oxygen generation.Rboh NADPH-oxidase 0.04 Archaeplastida
Zm00001e002305_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e039704_P001 No alias NADPH-oxidase (Rboh) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013112 FAD-bd_8 553 667
IPR013623 NADPH_Ox 120 223
IPR013130 Fe3_Rdtase_TM_dom 354 511
IPR013121 Fe_red_NAD-bd_6 674 849
No external refs found!