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Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Gene families : OG0003462 (Archaeplastida) Phylogenetic Tree(s): OG0003462_tree ,
OG_05_0002406 (LandPlants) Phylogenetic Tree(s): OG_05_0002406_tree ,
OG_06_0001809 (SeedPlants) Phylogenetic Tree(s): OG_06_0001809_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G12020 | |
| Cluster | HCCA: Cluster_168 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| GSVIVT01008571001 | No alias | No description available | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Neighborhood |
| BP | GO:0000725 | recombinational repair | IEP | Neighborhood |
| MF | GO:0003684 | damaged DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0003713 | transcription coactivator activity | IEP | Neighborhood |
| MF | GO:0003964 | RNA-directed DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0004605 | phosphatidate cytidylyltransferase activity | IEP | Neighborhood |
| CC | GO:0005739 | mitochondrion | IEP | Neighborhood |
| CC | GO:0005740 | mitochondrial envelope | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006260 | DNA replication | IEP | Neighborhood |
| BP | GO:0006261 | DNA-dependent DNA replication | IEP | Neighborhood |
| BP | GO:0006278 | RNA-dependent DNA biosynthetic process | IEP | Neighborhood |
| BP | GO:0006281 | DNA repair | IEP | Neighborhood |
| BP | GO:0006284 | base-excision repair | IEP | Neighborhood |
| BP | GO:0006302 | double-strand break repair | IEP | Neighborhood |
| BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006855 | drug transmembrane transport | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| BP | GO:0009269 | response to desiccation | IEP | Neighborhood |
| BP | GO:0009739 | response to gibberellin | IEP | Neighborhood |
| BP | GO:0009895 | negative regulation of catabolic process | IEP | Neighborhood |
| BP | GO:0010212 | response to ionizing radiation | IEP | Neighborhood |
| BP | GO:0010506 | regulation of autophagy | IEP | Neighborhood |
| BP | GO:0010507 | negative regulation of autophagy | IEP | Neighborhood |
| CC | GO:0015629 | actin cytoskeleton | IEP | Neighborhood |
| BP | GO:0015980 | energy derivation by oxidation of organic compounds | IEP | Neighborhood |
| MF | GO:0016621 | cinnamoyl-CoA reductase activity | IEP | Neighborhood |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
| BP | GO:0031330 | negative regulation of cellular catabolic process | IEP | Neighborhood |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | Neighborhood |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Neighborhood |
| MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
| MF | GO:0043130 | ubiquitin binding | IEP | Neighborhood |
| BP | GO:0045003 | double-strand break repair via synthesis-dependent strand annealing | IEP | Neighborhood |
| BP | GO:0045333 | cellular respiration | IEP | Neighborhood |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051445 | regulation of meiotic cell cycle | IEP | Neighborhood |
| BP | GO:0051446 | positive regulation of meiotic cell cycle | IEP | Neighborhood |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | Neighborhood |
| MF | GO:0070628 | proteasome binding | IEP | Neighborhood |
| BP | GO:0071897 | DNA biosynthetic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |