AT3G05280

Description : Integral membrane Yip1 family protein

Gene families : OG0002065 (Archaeplastida) Phylogenetic Tree(s): OG0002065_tree ,
OG_05_0002360 (LandPlants) Phylogenetic Tree(s): OG_05_0002360_tree ,
OG_06_0007182 (SeedPlants) Phylogenetic Tree(s): OG_06_0007182_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G05280
Cluster	HCCA: Cluster_186

Target	Alias	Description	ECC score	Gene Family Method	Actions
AT2G39805	No alias	Integral membrane Yip1 family protein	0.04	Archaeplastida
Gb_39698	No alias	no hits & (original description: none)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0016192	vesicle-mediated transport	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000162	tryptophan biosynthetic process	IEP	Neighborhood
MF	GO:0003857	3-hydroxyacyl-CoA dehydrogenase activity	IEP	Neighborhood
MF	GO:0003896	DNA primase activity	IEP	Neighborhood
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Neighborhood
MF	GO:0004300	enoyl-CoA hydratase activity	IEP	Neighborhood
MF	GO:0004834	tryptophan synthase activity	IEP	Neighborhood
MF	GO:0005047	signal recognition particle binding	IEP	Neighborhood
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005345	purine nucleobase transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005457	GDP-fucose transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005459	UDP-galactose transmembrane transporter activity	IEP	Neighborhood
MF	GO:0005460	UDP-glucose transmembrane transporter activity	IEP	Neighborhood
CC	GO:0005618	cell wall	IEP	Neighborhood
CC	GO:0005747	mitochondrial respiratory chain complex I	IEP	Neighborhood
CC	GO:0005774	vacuolar membrane	IEP	Neighborhood
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
CC	GO:0005911	cell-cell junction	IEP	Neighborhood
BP	GO:0006417	regulation of translation	IEP	Neighborhood
BP	GO:0006629	lipid metabolic process	IEP	Neighborhood
BP	GO:0006665	sphingolipid metabolic process	IEP	Neighborhood
BP	GO:0006694	steroid biosynthetic process	IEP	Neighborhood
BP	GO:0006722	triterpenoid metabolic process	IEP	Neighborhood
BP	GO:0006730	one-carbon metabolic process	IEP	Neighborhood
BP	GO:0006863	purine nucleobase transport	IEP	Neighborhood
BP	GO:0008202	steroid metabolic process	IEP	Neighborhood
BP	GO:0009058	biosynthetic process	IEP	Neighborhood
BP	GO:0009309	amine biosynthetic process	IEP	Neighborhood
CC	GO:0009506	plasmodesma	IEP	Neighborhood
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015205	nucleobase transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Neighborhood
BP	GO:0015783	GDP-fucose transmembrane transport	IEP	Neighborhood
BP	GO:0015786	UDP-glucose transmembrane transport	IEP	Neighborhood
BP	GO:0015851	nucleobase transport	IEP	Neighborhood
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016104	triterpenoid biosynthetic process	IEP	Neighborhood
BP	GO:0016125	sterol metabolic process	IEP	Neighborhood
BP	GO:0016126	sterol biosynthetic process	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
MF	GO:0016508	long-chain-enoyl-CoA hydratase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016832	aldehyde-lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016836	hydro-lyase activity	IEP	Neighborhood
BP	GO:0019742	pentacyclic triterpenoid metabolic process	IEP	Neighborhood
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
CC	GO:0030054	cell junction	IEP	Neighborhood
BP	GO:0030148	sphingolipid biosynthetic process	IEP	Neighborhood
CC	GO:0030312	external encapsulating structure	IEP	Neighborhood
CC	GO:0030964	NADH dehydrogenase complex	IEP	Neighborhood
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Neighborhood
MF	GO:0033984	indole-3-glycerol-phosphate lyase activity	IEP	Neighborhood
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Neighborhood
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Neighborhood
MF	GO:0036080	purine nucleotide-sugar transmembrane transporter activity	IEP	Neighborhood
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Neighborhood
BP	GO:0042991	obsolete transcription factor import into nucleus	IEP	Neighborhood
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Neighborhood
BP	GO:0044238	primary metabolic process	IEP	Neighborhood
BP	GO:0044249	cellular biosynthetic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Neighborhood
CC	GO:0044432	endoplasmic reticulum part	IEP	Neighborhood
CC	GO:0044437	vacuolar part	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
CC	GO:0045271	respiratory chain complex I	IEP	Neighborhood
BP	GO:0045727	positive regulation of translation	IEP	Neighborhood
BP	GO:0046219	indolalkylamine biosynthetic process	IEP	Neighborhood
BP	GO:0046519	sphingoid metabolic process	IEP	Neighborhood
BP	GO:0046520	sphingoid biosynthetic process	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
BP	GO:0048825	cotyledon development	IEP	Neighborhood
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Neighborhood
BP	GO:0071704	organic substance metabolic process	IEP	Neighborhood
BP	GO:0072334	UDP-galactose transmembrane transport	IEP	Neighborhood
BP	GO:0090480	purine nucleotide-sugar transmembrane transport	IEP	Neighborhood
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Neighborhood
BP	GO:0097164	ammonium ion metabolic process	IEP	Neighborhood
MF	GO:0097747	RNA polymerase activity	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
BP	GO:0098656	anion transmembrane transport	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood
BP	GO:1901264	carbohydrate derivative transport	IEP	Neighborhood
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Neighborhood
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Neighborhood
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Neighborhood
BP	GO:1901576	organic substance biosynthetic process	IEP	Neighborhood
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006977	Yip1	92	255

External Links

No external refs found!

AT3G05280

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation