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  5. Gb_40554

Gb_40554


Description : beta-galactosidase (BGAL)


Gene families : OG0000133 (Archaeplastida) Phylogenetic Tree(s): OG0000133_tree ,
OG_05_0002109 (LandPlants) Phylogenetic Tree(s): OG_05_0002109_tree ,
OG_06_0001477 (SeedPlants) Phylogenetic Tree(s): OG_06_0001477_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40554
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00054750 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 Archaeplastida
AT2G32810 BGAL9 beta galactosidase 9 0.04 Archaeplastida
AT4G35010 BGAL11 beta-galactosidase 11 0.03 Archaeplastida
GSVIVT01018853001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
GSVIVT01022339001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
GSVIVT01025170001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.04 Archaeplastida
LOC_Os02g12730.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
LOC_Os03g06940.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
LOC_Os06g37560.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
LOC_Os06g42310.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
MA_665188g0010 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
MA_87238g0010 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Solyc02g078950.4.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Solyc06g062580.3.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Zm00001e000496_P002 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Zm00001e003992_P005 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e020528_P001 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Zm00001e039014_P001 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR031330 Gly_Hdrlase_35_cat 37 122
IPR031330 Gly_Hdrlase_35_cat 246 387
IPR031330 Gly_Hdrlase_35_cat 158 222
No external refs found!