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  5. Gb_40616

Gb_40616


Description : transcription factor (DBP). clade G phosphatase


Gene families : OG0000802 (Archaeplastida) Phylogenetic Tree(s): OG0000802_tree ,
OG_05_0058326 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0051394 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40616
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00195190 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.DBP... 0.04 Archaeplastida
AT3G62260 No alias Protein phosphatase 2C family protein 0.04 Archaeplastida
LOC_Os01g19130.1 No alias transcription factor (DBP) 0.03 Archaeplastida
MA_16483g0010 No alias transcription factor (DBP) 0.04 Archaeplastida
Pp3c2_10660V3.1 No alias Protein phosphatase 2C family protein 0.02 Archaeplastida
Smo102683 No alias RNA biosynthesis.transcriptional activation.DBP... 0.03 Archaeplastida
Solyc01g068000.4.1 No alias transcription factor (DBP) 0.03 Archaeplastida
Solyc06g009390.3.1 No alias transcription factor (DBP) 0.02 Archaeplastida
Zm00001e040337_P001 No alias transcription factor (DBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 149 403
No external refs found!