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  5. AT3G05450

AT3G05450


Description : CONTAINS InterPro DOMAIN/s: Cystatin-related, plant (InterPro:IPR006525); BEST Arabidopsis thaliana protein match is: Cystatin/monellin superfamily protein (TAIR:AT3G05685.1); Has 2098 Blast hits to 1525 proteins in 202 species: Archae - 2; Bacteria - 561; Metazoa - 485; Fungi - 302; Plants - 191; Viruses - 20; Other Eukaryotes - 537 (source: NCBI BLink).


Gene families : OG0010570 (Archaeplastida) Phylogenetic Tree(s): OG0010570_tree ,
OG_05_0010579 (LandPlants) Phylogenetic Tree(s): OG_05_0010579_tree ,
OG_06_0010256 (SeedPlants) Phylogenetic Tree(s): OG_06_0010256_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G05450
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT4G03565 No alias Cystatin/monellin superfamily protein 0.13 Archaeplastida
AT4G03570 No alias Cystatin/monellin superfamily protein 0.03 Archaeplastida
AT5G17090 No alias Cystatin/monellin superfamily protein 0.05 Archaeplastida
AT5G17110 No alias Cystatin/monellin superfamily protein 0.09 Archaeplastida
AT5G17150 No alias Cystatin/monellin superfamily protein 0.12 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007129 synapsis IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
MF GO:0046910 pectinesterase inhibitor activity IEP Neighborhood
BP GO:0061982 meiosis I cell cycle process IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!