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  5. Gb_40677

Gb_40677


Description : no hits & (original description: none)


Gene families : OG0001085 (Archaeplastida) Phylogenetic Tree(s): OG0001085_tree ,
OG_05_0000943 (LandPlants) Phylogenetic Tree(s): OG_05_0000943_tree ,
OG_06_0002303 (SeedPlants) Phylogenetic Tree(s): OG_06_0002303_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40677
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00102010 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT5G16680 No alias RING/FYVE/PHD zinc finger superfamily protein 0.08 Archaeplastida
GSVIVT01024330001 No alias No description available 0.05 Archaeplastida
LOC_Os10g42196.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os11g18770.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g24540.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_106351g0010 No alias no hits & (original description: none) 0.1 Archaeplastida
MA_175822g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
Mp6g14570.1 No alias no hits & (original description: none) 0.1 Archaeplastida
Pp3c5_28530V3.1 No alias RING/FYVE/PHD zinc finger superfamily protein 0.13 Archaeplastida
Pp3c6_1100V3.1 No alias RING/FYVE/PHD zinc finger superfamily protein 0.1 Archaeplastida
Smo439529 No alias No description available 0.04 Archaeplastida
Solyc04g050720.4.1 No alias No annotation 0.03 Archaeplastida
Zm00001e002005_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e002445_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e029823_P001 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!