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  5. Gb_40778

Gb_40778


Description : Stem-specific protein TSJT1 OS=Nicotiana tabacum (sp|p24805|tsjt1_tobac : 147.0)


Gene families : OG0000604 (Archaeplastida) Phylogenetic Tree(s): OG0000604_tree ,
OG_05_0001003 (LandPlants) Phylogenetic Tree(s): OG_05_0001003_tree ,
OG_06_0004247 (SeedPlants) Phylogenetic Tree(s): OG_06_0004247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40778
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00269560 evm_27.TU.AmTr_v1... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.02 Archaeplastida
AMTR_s00009p00267130 evm_27.TU.AmTr_v1... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.02 Archaeplastida
GSVIVT01002031001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.02 Archaeplastida
GSVIVT01002062001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.04 Archaeplastida
GSVIVT01017899001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 Archaeplastida
MA_10434639g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 Archaeplastida
MA_109804g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 Archaeplastida
Solyc06g054370.2.1 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 Archaeplastida
Solyc12g013700.2.1 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0004474 malate synthase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006097 glyoxylate cycle IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0046487 glyoxylate metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR024286 DUF3700 2 228
No external refs found!