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  5. Gb_41312

Gb_41312


Description : F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana (sp|q9fkj0|fk132_arath : 426.0)


Gene families : OG0000977 (Archaeplastida) Phylogenetic Tree(s): OG0000977_tree ,
OG_05_0000627 (LandPlants) Phylogenetic Tree(s): OG_05_0000627_tree ,
OG_06_0001173 (SeedPlants) Phylogenetic Tree(s): OG_06_0001173_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41312
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AT1G14330 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Archaeplastida
LOC_Os03g07530.1 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.02 Archaeplastida
Solyc11g069320.1.1 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e012830_P001 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e038898_P001 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
CC GO:0072546 ER membrane protein complex IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR006652 Kelch_1 251 296
IPR006652 Kelch_1 299 341
No external refs found!