Gb_41749

Description : replication fork tethering component POLA2 of DNA polymerase alpha complex

Gene families : OG0004316 (Archaeplastida) Phylogenetic Tree(s): OG0004316_tree ,
OG_05_0004814 (LandPlants) Phylogenetic Tree(s): OG_05_0004814_tree ,
OG_06_0004335 (SeedPlants) Phylogenetic Tree(s): OG_06_0004335_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_41749
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001107.10	No alias	Cell cycle.interphase.DNA replication.elongation.DNA...	0.02	Archaeplastida
Cre01.g017450	No alias	Cell cycle.interphase.DNA replication.elongation.DNA...	0.02	Archaeplastida
GSVIVT01010354001	No alias	Cell cycle.interphase.DNA replication.elongation.DNA...	0.03	Archaeplastida
LOC_Os12g13950.1	No alias	replication fork tethering component POLA2 of DNA...	0.02	Archaeplastida
MA_14020g0030	No alias	replication fork tethering component POLA2 of DNA...	0.02	Archaeplastida
Mp6g03190.1	No alias	replication fork tethering component POLA2 of DNA...	0.05	Archaeplastida
Solyc05g014540.3.1	No alias	replication fork tethering component POLA2 of DNA...	0.04	Archaeplastida
Zm00001e039659_P001	No alias	replication fork tethering component POLA2 of DNA...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003777	microtubule motor activity	IEP	Neighborhood
BP	GO:0006281	DNA repair	IEP	Neighborhood
BP	GO:0006284	base-excision repair	IEP	Neighborhood
BP	GO:0006401	RNA catabolic process	IEP	Neighborhood
BP	GO:0006928	movement of cell or subcellular component	IEP	Neighborhood
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Neighborhood
BP	GO:0007018	microtubule-based movement	IEP	Neighborhood
BP	GO:0019439	aromatic compound catabolic process	IEP	Neighborhood
CC	GO:0032299	ribonuclease H2 complex	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Neighborhood
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Neighborhood
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Neighborhood
BP	GO:0046700	heterocycle catabolic process	IEP	Neighborhood
MF	GO:0051536	iron-sulfur cluster binding	IEP	Neighborhood
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Neighborhood
MF	GO:0051540	metal cluster binding	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007185	DNA_pol_alpha/epsilon_bsu	378	589

External Links

No external refs found!

Gb_41749

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation