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  5. Zm00001e000036_P001

Zm00001e000036_P001


Description : Expansin-B4 OS=Oryza sativa subsp. japonica (sp|q94lr4|expb4_orysj : 405.0)


Gene families : OG0000383 (Archaeplastida) Phylogenetic Tree(s): OG0000383_tree ,
OG_05_0021145 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0020369 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000036_P001
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00266410 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-type expansin 0.02 Archaeplastida
AMTR_s00111p00059150 evm_27.TU.AmTr_v1... Putative expansin-B2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G20750 EXPB1, ATEXPB1,... expansin B1 0.06 Archaeplastida
AT2G45110 ATHEXP BETA 1.1,... expansin B4 0.03 Archaeplastida
LOC_Os02g44106.1 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os02g44108.1 No alias Expansin-B11 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os03g01260.1 No alias Expansin-B8 OS=Oryza sativa subsp. japonica... 0.07 Archaeplastida
LOC_Os03g01270.1 No alias Expansin-B7 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os04g44780.1 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os04g46650.1 No alias Expansin-B5 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os10g40700.1 No alias Expansin-B6 OS=Oryza sativa subsp. japonica... 0.09 Archaeplastida
LOC_Os10g40710.1 No alias Expansin-B2 OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
LOC_Os10g40720.1 No alias Expansin-B3 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_10313796g0010 No alias Expansin-B16 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_166764g0010 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_78155g0010 No alias Expansin-B17 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_9323664g0010 No alias Expansin-B3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c17_12970V3.1 No alias expansin B3 0.02 Archaeplastida
Pp3c1_37980V3.1 No alias expansin B3 0.02 Archaeplastida
Smo171427 No alias Expansin-B17 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Solyc10g008440.3.1 No alias beta-class expansin 0.03 Archaeplastida
Solyc10g018500.1.1 No alias Putative expansin-B2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e000038_P001 No alias Expansin-B7 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e002337_P001 No alias Expansin-B3 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e015230_P001 No alias beta-class expansin 0.03 Archaeplastida
Zm00001e036860_P001 No alias Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e037884_P001 No alias Expansin-B6 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e037885_P001 No alias Expansin-B6 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e041521_P001 No alias Expansin-B5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 175 256
IPR009009 RlpA-like_DPBB 83 163
No external refs found!