AT3G06470

Description : GNS1/SUR4 membrane protein family

Gene families : OG0001871 (Archaeplastida) Phylogenetic Tree(s): OG0001871_tree ,
OG_05_0001797 (LandPlants) Phylogenetic Tree(s): OG_05_0001797_tree ,
OG_06_0007060 (SeedPlants) Phylogenetic Tree(s): OG_06_0007060_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G06470

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006643	membrane lipid metabolic process	None	Extended
BP	GO:0006665	sphingolipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016021	integral component of membrane	ISS	Interproscan
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
BP	GO:0030148	sphingolipid biosynthetic process	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0046467	membrane lipid biosynthetic process	None	Extended
BP	GO:0046519	sphingoid metabolic process	None	Extended
BP	GO:0046520	sphingoid biosynthetic process	RCA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097164	ammonium ion metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IEP	Neighborhood
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Neighborhood
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Neighborhood
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003727	single-stranded RNA binding	IEP	Neighborhood
BP	GO:0006397	mRNA processing	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0008143	poly(A) binding	IEP	Neighborhood
BP	GO:0008380	RNA splicing	IEP	Neighborhood
BP	GO:0009735	response to cytokinin	IEP	Neighborhood
BP	GO:0010193	response to ozone	IEP	Neighborhood
BP	GO:0016071	mRNA metabolic process	IEP	Neighborhood
MF	GO:0016829	lyase activity	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Neighborhood
MF	GO:0030570	pectate lyase activity	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
BP	GO:0046677	response to antibiotic	IEP	Neighborhood
MF	GO:0070717	poly-purine tract binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002076	ELO_fam	31	271

External Links

No external refs found!

AT3G06470

Expression Profile

Co-expression Networks

Functional Annotation