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  5. Zm00001e000116_P001

Zm00001e000116_P001


Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0000117 (Archaeplastida) Phylogenetic Tree(s): OG0000117_tree ,
OG_05_0000081 (LandPlants) Phylogenetic Tree(s): OG_05_0000081_tree ,
OG_06_0000968 (SeedPlants) Phylogenetic Tree(s): OG_06_0000968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000116_P001
Cluster HCCA: Cluster_356

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00235160 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G63090 PP2-A11, AtPP2-A11 phloem protein 2-A11 0.03 Archaeplastida
AT3G61060 AtPP2-A13, PP2-A13 phloem protein 2-A13 0.03 Archaeplastida
GSVIVT01003906001 No alias F-box protein PP2-B1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01010614001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
GSVIVT01012084001 No alias Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01012085001 No alias No description available 0.03 Archaeplastida
GSVIVT01027514001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01031160001 No alias F-box protein PP2-B15 OS=Arabidopsis thaliana 0.03 Archaeplastida
Mp3g01690.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c24_14280V3.1 No alias phloem protein 2-A15 0.03 Archaeplastida
Solyc02g069020.3.1 No alias Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g069030.3.1 No alias Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g069040.4.1 No alias Lectin OS=Luffa acutangula (sp|c0hjv2|lec_lufac : 91.7) 0.03 Archaeplastida
Solyc10g017960.2.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida
Zm00001e002143_P001 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025886 PP2-like 125 285
No external refs found!