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  5. Zm00001e000449_P001

Zm00001e000449_P001


Description : Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum (sp|p09444|lea34_goshi : 140.0)


Gene families : OG0001382 (Archaeplastida) Phylogenetic Tree(s): OG0001382_tree ,
OG_05_0002277 (LandPlants) Phylogenetic Tree(s): OG_05_0002277_tree ,
OG_06_0002008 (SeedPlants) Phylogenetic Tree(s): OG_06_0002008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000449_P001
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT3G22490 No alias Seed maturation protein 0.15 Archaeplastida
AT3G22500 ATECP31 Seed maturation protein 0.16 Archaeplastida
AT5G53260 No alias Seed maturation protein 0.13 Archaeplastida
AT5G53270 No alias Seed maturation protein 0.09 Archaeplastida
GSVIVT01001170001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.05 Archaeplastida
GSVIVT01017985001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.1 Archaeplastida
GSVIVT01021881001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.1 Archaeplastida
Gb_18212 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.03 Archaeplastida
LOC_Os03g06360.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.24 Archaeplastida
LOC_Os03g53610.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.1 Archaeplastida
LOC_Os03g53620.1 No alias no hits & (original description: none) 0.26 Archaeplastida
LOC_Os06g23350.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.22 Archaeplastida
LOC_Os10g29570.1 No alias no hits & (original description: none) 0.2 Archaeplastida
LOC_Os12g43140.1 No alias no hits & (original description: none) 0.25 Archaeplastida
MA_14118g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_49897g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g06630.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c25_10310V3.1 No alias Seed maturation protein 0.02 Archaeplastida
Pp3c5_27600V3.1 No alias No annotation 0.01 Archaeplastida
Pp3c6_200V3.1 No alias Seed maturation protein 0.04 Archaeplastida
Smo84789 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc09g065360.4.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.1 Archaeplastida
Solyc09g082100.3.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.12 Archaeplastida
Solyc09g082110.4.1 No alias Late embryogenesis abundant protein D-34 OS=Gossypium... 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR007011 SMP 24 79
IPR007011 SMP 163 220
IPR007011 SMP 229 285
No external refs found!