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  5. Zm00001e001054_P002

Zm00001e001054_P002


Description : component NF-YC of NF-Y transcription factor complex


Gene families : OG0000443 (Archaeplastida) Phylogenetic Tree(s): OG0000443_tree ,
OG_05_0000515 (LandPlants) Phylogenetic Tree(s): OG_05_0000515_tree ,
OG_06_0000553 (SeedPlants) Phylogenetic Tree(s): OG_06_0000553_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001054_P002
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00054980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.03 Archaeplastida
AT3G48590 HAP5A, NF-YC1, ATHAP5A nuclear factor Y, subunit C1 0.02 Archaeplastida
LOC_Os03g14669.2 No alias component NF-YC of NF-Y transcription factor complex 0.05 Archaeplastida
Mp1g04550.1 No alias component NF-YC of NF-Y transcription factor complex 0.02 Archaeplastida
Pp3c10_2910V3.1 No alias nuclear factor Y, subunit C2 0.02 Archaeplastida
Smo58662 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 69 132
No external refs found!