Zm00001e001253_P001


Description : C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000107 (SeedPlants) Phylogenetic Tree(s): OG_06_0000107_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001253_P001
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00104280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.06 Archaeplastida
AT1G27730 ZAT10, STZ salt tolerance zinc finger 0.05 Archaeplastida
AT2G28710 No alias C2H2-type zinc finger family protein 0.08 Archaeplastida
AT2G37430 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT3G19580 AZF2, ZF2 zinc-finger protein 2 0.04 Archaeplastida
AT3G46080 No alias C2H2-type zinc finger family protein 0.06 Archaeplastida
AT3G46090 ZAT7 C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT3G53600 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
AT3G60580 No alias C2H2-like zinc finger protein 0.01 Archaeplastida
AT5G03510 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
AT5G04340 CZF2, ZAT6, C2H2 zinc finger of Arabidopsis thaliana 6 0.04 Archaeplastida
AT5G04390 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
AT5G43170 AZF3, ZF3 zinc-finger protein 3 0.03 Archaeplastida
AT5G59820 RHL41, ZAT12 C2H2-type zinc finger family protein 0.05 Archaeplastida
AT5G67450 AZF1, ZF1 zinc-finger protein 1 0.03 Archaeplastida
GSVIVT01023887001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01037851001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_06484 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_06485 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_10419 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Gb_10422 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Gb_10423 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_16414 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Gb_16419 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Gb_40151 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os01g62130.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os01g62190.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
LOC_Os02g44120.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g32220.1 No alias C2H2 zinc finger transcription factor 0.1 Archaeplastida
LOC_Os03g41390.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os03g55540.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
LOC_Os03g60540.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os03g60560.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
LOC_Os03g60570.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os04g08060.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os04g46670.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os05g02390.1 No alias C2H2 zinc finger transcription factor 0.09 Archaeplastida
LOC_Os07g40080.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os08g20580.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os11g47620.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os11g47630.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os12g39400.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_109421g0010 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
MA_167434g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_19127g0010 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
MA_5277601g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_602g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_68331g0010 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
MA_837209g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_85675g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_858691g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_93487g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc01g107170.2.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc02g088670.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc04g077980.1.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Solyc05g054650.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc06g060740.3.1 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Solyc06g075775.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc09g008440.1.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc12g088390.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc12g088400.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e005777_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e006184_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e011755_P001 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Zm00001e011756_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e011983_P001 No alias C2H2 zinc finger transcription factor 0.09 Archaeplastida
Zm00001e019350_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e023172_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e028784_P001 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Zm00001e035423_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010167 response to nitrate IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0015706 nitrate transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!