AT1G12290

Description : Disease resistance protein (CC-NBS-LRR class) family

Gene families : OG0000053 (Archaeplastida) Phylogenetic Tree(s): OG0000053_tree ,
OG_05_0000018 (LandPlants) Phylogenetic Tree(s): OG_05_0000018_tree ,
OG_06_0000005 (SeedPlants) Phylogenetic Tree(s): OG_06_0000005_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G12290
Cluster	HCCA: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00126150	evm_27.TU.AmTr_v1...	Disease resistance protein RPS5 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00019p00088510	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00032p00050560	evm_27.TU.AmTr_v1...	Putative disease resistance protein At5g05400...	0.02	Archaeplastida
AMTR_s00050p00210650	evm_27.TU.AmTr_v1...	Putative disease resistance protein At1g63350...	0.03	Archaeplastida
AMTR_s00071p00163290	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g27220...	0.03	Archaeplastida
AMTR_s00071p00163330	evm_27.TU.AmTr_v1...	Probable disease resistance protein At5g63020...	0.03	Archaeplastida
AMTR_s00099p00016360	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00771p00010380	evm_27.TU.AmTr_v1...	Probable disease resistance protein At4g27220...	0.03	Archaeplastida
AT1G12210	RFL1	RPS5-like 1	0.05	Archaeplastida
AT1G12220	RPS5	Disease resistance protein (CC-NBS-LRR class) family	0.06	Archaeplastida
AT1G12280	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.08	Archaeplastida
AT1G61190	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.04	Archaeplastida
AT1G61310	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.05	Archaeplastida
AT1G63350	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.04	Archaeplastida
AT4G26090	RPS2	NB-ARC domain-containing disease resistance protein	0.05	Archaeplastida
AT5G05400	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.05	Archaeplastida
AT5G47260	No alias	ATP binding;GTP binding;nucleotide...	0.03	Archaeplastida
GSVIVT01014595001	No alias	Disease resistance protein At4g27190 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01017020001	No alias	Probable disease resistance protein At5g63020...	0.05	Archaeplastida
GSVIVT01017023001	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01017136001	No alias	Probable disease resistance protein At1g61190...	0.03	Archaeplastida
GSVIVT01017142001	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.05	Archaeplastida
GSVIVT01017143001	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01017149001	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01017227001	No alias	No description available	0.05	Archaeplastida
GSVIVT01017232001	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01034252001	No alias	Probable disease resistance protein At1g61300...	0.03	Archaeplastida
GSVIVT01038404001	No alias	Probable disease resistance protein At1g12290...	0.03	Archaeplastida
GSVIVT01038446001	No alias	Probable disease resistance protein At1g52660...	0.03	Archaeplastida
Gb_12853	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Gb_18201	No alias	Probable disease resistance protein At1g61180...	0.02	Archaeplastida
LOC_Os01g57870.1	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os01g72680.1	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os11g29090.1	No alias	Disease resistance protein At4g27190 OS=Arabidopsis...	0.03	Archaeplastida
LOC_Os11g36410.1	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os12g10410.1	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_10436967g0010	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_162415g0010	No alias	Probable disease resistance protein At1g61310...	0.02	Archaeplastida
MA_23524g0010	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.04	Archaeplastida
MA_834155g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
Pp3c3_38130V3.1	No alias	disease resistance protein (TIR-NBS-LRR class)	0.02	Archaeplastida
Zm00001e019599_P001	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006497	protein lipidation	None	Extended
BP	GO:0006498	N-terminal protein lipidation	None	Extended
BP	GO:0006499	N-terminal protein myristoylation	IDA	Interproscan
BP	GO:0006499	N-terminal protein myristoylation	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018377	protein myristoylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0031365	N-terminal protein amino acid modification	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043543	protein acylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	IEP	Neighborhood
BP	GO:0000303	response to superoxide	IEP	Neighborhood
BP	GO:0000305	response to oxygen radical	IEP	Neighborhood
MF	GO:0001653	peptide receptor activity	IEP	Neighborhood
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0003729	mRNA binding	IEP	Neighborhood
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0003843	1,3-beta-D-glucan synthase activity	IEP	Neighborhood
MF	GO:0004402	histone acetyltransferase activity	IEP	Neighborhood
MF	GO:0004430	1-phosphatidylinositol 4-kinase activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005886	plasma membrane	IEP	Neighborhood
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Neighborhood
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IEP	Neighborhood
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEP	Neighborhood
BP	GO:0006473	protein acetylation	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
BP	GO:0006487	protein N-linked glycosylation	IEP	Neighborhood
BP	GO:0006623	protein targeting to vacuole	IEP	Neighborhood
BP	GO:0006809	nitric oxide biosynthetic process	IEP	Neighborhood
BP	GO:0006817	phosphate ion transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006928	movement of cell or subcellular component	IEP	Neighborhood
BP	GO:0007034	vacuolar transport	IEP	Neighborhood
BP	GO:0007049	cell cycle	IEP	Neighborhood
BP	GO:0007154	cell communication	IEP	Neighborhood
BP	GO:0007166	cell surface receptor signaling pathway	IEP	Neighborhood
BP	GO:0007167	enzyme linked receptor protein signaling pathway	IEP	Neighborhood
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	Neighborhood
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	Neighborhood
MF	GO:0008195	phosphatidate phosphatase activity	IEP	Neighborhood
BP	GO:0009292	genetic transfer	IEP	Neighborhood
BP	GO:0009294	DNA mediated transformation	IEP	Neighborhood
BP	GO:0009556	microsporogenesis	IEP	Neighborhood
BP	GO:0009816	defense response to bacterium, incompatible interaction	IEP	Neighborhood
BP	GO:0010093	specification of floral organ identity	IEP	Neighborhood
BP	GO:0010101	post-embryonic root morphogenesis	IEP	Neighborhood
BP	GO:0010102	lateral root morphogenesis	IEP	Neighborhood
BP	GO:0010225	response to UV-C	IEP	Neighborhood
BP	GO:0010374	stomatal complex development	IEP	Neighborhood
BP	GO:0010966	regulation of phosphate transport	IEP	Neighborhood
CC	GO:0012506	vesicle membrane	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016036	cellular response to phosphate starvation	IEP	Neighborhood
BP	GO:0016192	vesicle-mediated transport	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
CC	GO:0016459	myosin complex	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0017017	MAP kinase tyrosine/serine/threonine phosphatase activity	IEP	Neighborhood
CC	GO:0017119	Golgi transport complex	IEP	Neighborhood
MF	GO:0017137	Rab GTPase binding	IEP	Neighborhood
MF	GO:0019899	enzyme binding	IEP	Neighborhood
MF	GO:0019901	protein kinase binding	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
BP	GO:0030029	actin filament-based process	IEP	Neighborhood
BP	GO:0030048	actin filament-based movement	IEP	Neighborhood
CC	GO:0030659	cytoplasmic vesicle membrane	IEP	Neighborhood
MF	GO:0030742	GTP-dependent protein binding	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
BP	GO:0031347	regulation of defense response	IEP	Neighborhood
BP	GO:0033036	macromolecule localization	IEP	Neighborhood
BP	GO:0033037	polysaccharide localization	IEP	Neighborhood
MF	GO:0033549	MAP kinase phosphatase activity	IEP	Neighborhood
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0034293	sexual sporulation	IEP	Neighborhood
CC	GO:0035619	root hair tip	IEP	Neighborhood
BP	GO:0042136	neurotransmitter biosynthetic process	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
MF	GO:0043424	protein histidine kinase binding	IEP	Neighborhood
BP	GO:0043934	sporulation	IEP	Neighborhood
BP	GO:0044257	cellular protein catabolic process	IEP	Neighborhood
CC	GO:0044459	plasma membrane part	IEP	Neighborhood
CC	GO:0044463	cell projection part	IEP	Neighborhood
BP	GO:0044764	multi-organism cellular process	IEP	Neighborhood
BP	GO:0046209	nitric oxide metabolic process	IEP	Neighborhood
BP	GO:0048193	Golgi vesicle transport	IEP	Neighborhood
BP	GO:0048236	plant-type sporogenesis	IEP	Neighborhood
BP	GO:0048438	floral whorl development	IEP	Neighborhood
BP	GO:0048467	gynoecium development	IEP	Neighborhood
BP	GO:0048468	cell development	IEP	Neighborhood
BP	GO:0048583	regulation of response to stimulus	IEP	Neighborhood
BP	GO:0048768	root hair cell tip growth	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051321	meiotic cell cycle	IEP	Neighborhood
BP	GO:0051640	organelle localization	IEP	Neighborhood
BP	GO:0051641	cellular localization	IEP	Neighborhood
BP	GO:0051645	Golgi localization	IEP	Neighborhood
BP	GO:0051646	mitochondrion localization	IEP	Neighborhood
BP	GO:0052386	cell wall thickening	IEP	Neighborhood
BP	GO:0052543	callose deposition in cell wall	IEP	Neighborhood
BP	GO:0052545	callose localization	IEP	Neighborhood
MF	GO:0052742	phosphatidylinositol kinase activity	IEP	Neighborhood
BP	GO:0055062	phosphate ion homeostasis	IEP	Neighborhood
BP	GO:0055081	anion homeostasis	IEP	Neighborhood
BP	GO:0055083	monovalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0060151	peroxisome localization	IEP	Neighborhood
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood
BP	GO:0070727	cellular macromolecule localization	IEP	Neighborhood
BP	GO:0072505	divalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0072506	trivalent inorganic anion homeostasis	IEP	Neighborhood
BP	GO:0072665	protein localization to vacuole	IEP	Neighborhood
BP	GO:0072666	establishment of protein localization to vacuole	IEP	Neighborhood
BP	GO:0080134	regulation of response to stress	IEP	Neighborhood
BP	GO:0090436	leaf pavement cell development	IEP	Neighborhood
BP	GO:0090558	plant epidermis development	IEP	Neighborhood
BP	GO:0090701	specification of plant organ identity	IEP	Neighborhood
CC	GO:0120038	plasma membrane bounded cell projection part	IEP	Neighborhood
BP	GO:1903795	regulation of inorganic anion transmembrane transport	IEP	Neighborhood
BP	GO:2000185	regulation of phosphate transmembrane transport	IEP	Neighborhood
BP	GO:2001057	reactive nitrogen species metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	540	599
IPR002182	NB-ARC	159	401

External Links

No external refs found!

AT1G12290

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation