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  5. Zm00001e001632_P001

Zm00001e001632_P001


Description : no hits & (original description: none)


Gene families : OG0000861 (Archaeplastida) Phylogenetic Tree(s): OG0000861_tree ,
OG_05_0006224 (LandPlants) Phylogenetic Tree(s): OG_05_0006224_tree ,
OG_06_0009529 (SeedPlants) Phylogenetic Tree(s): OG_06_0009529_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001632_P001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00194810 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.07 Archaeplastida
AMTR_s00164p00068000 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.06 Archaeplastida
AT1G09130 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.02 Archaeplastida
AT1G49970 CLPR1, SVR2, NCLPP5 CLP protease proteolytic subunit 1 0.04 Archaeplastida
Cpa|evm.model.tig00020952.49 No alias Protein degradation.peptidase families.serine-type... 0.02 Archaeplastida
Cre03.g204350 No alias Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
Cre07.g331500 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
Cre14.g619100 No alias Protein degradation.peptidase families.serine-type... 0.05 Archaeplastida
GSVIVT01003696001 No alias Protein degradation.peptidase families.serine-type... 0.14 Archaeplastida
GSVIVT01031146001 No alias Protein degradation.peptidase families.serine-type... 0.08 Archaeplastida
Gb_40312 No alias non-proteolytic core component ClpR of chloroplast... 0.06 Archaeplastida
LOC_Os01g16530.1 No alias non-proteolytic core component ClpR of chloroplast... 0.02 Archaeplastida
LOC_Os03g22430.1 No alias non-proteolytic core component ClpR of chloroplast... 0.1 Archaeplastida
MA_10429819g0020 No alias non-proteolytic core component ClpR of chloroplast... 0.05 Archaeplastida
MA_6114g0010 No alias ATP-dependent Clp protease proteolytic subunit-related... 0.03 Archaeplastida
Mp6g21300.1 No alias non-proteolytic core component ClpR of chloroplast... 0.03 Archaeplastida
Mp7g03170.1 No alias non-proteolytic core component ClpR of chloroplast... 0.04 Archaeplastida
Pp3c13_21640V3.1 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.03 Archaeplastida
Pp3c26_8310V3.1 No alias CLP protease R subunit 4 0.05 Archaeplastida
Pp3c2_27590V3.1 No alias CLP protease R subunit 4 0.07 Archaeplastida
Pp3c3_12000V3.1 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.04 Archaeplastida
Smo153292 No alias Protein degradation.peptidase families.serine-type... 0.06 Archaeplastida
Solyc01g099690.3.1 No alias non-proteolytic core component ClpR of chloroplast... 0.04 Archaeplastida
Solyc08g077890.3.1 No alias non-proteolytic core component ClpR of chloroplast... 0.06 Archaeplastida
Solyc10g049710.2.1 No alias non-proteolytic core component ClpR of chloroplast... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0043647 inositol phosphate metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Neighborhood
BP GO:0046855 inositol phosphate dephosphorylation IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
BP GO:0071545 inositol phosphate catabolic process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!