Coexpression cluster: Cluster_39 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016070 RNA metabolic process 8.93% (10/112) 3.4 0.0 1.1e-05
GO:0043039 tRNA aminoacylation 4.46% (5/112) 5.1 0.0 1.3e-05
GO:0043038 amino acid activation 4.46% (5/112) 5.1 0.0 1.3e-05
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.46% (5/112) 5.1 0.0 1.3e-05
GO:0004812 aminoacyl-tRNA ligase activity 4.46% (5/112) 5.1 0.0 1.3e-05
GO:0016874 ligase activity 5.36% (6/112) 4.28 1e-06 1.5e-05
GO:0090304 nucleic acid metabolic process 8.93% (10/112) 2.96 1e-06 1.6e-05
GO:0006725 cellular aromatic compound metabolic process 10.71% (12/112) 2.62 1e-06 1.7e-05
GO:1901360 organic cyclic compound metabolic process 10.71% (12/112) 2.58 1e-06 1.7e-05
GO:0034660 ncRNA metabolic process 5.36% (6/112) 4.31 1e-06 1.8e-05
GO:0046483 heterocycle metabolic process 10.71% (12/112) 2.63 1e-06 1.9e-05
GO:0006418 tRNA aminoacylation for protein translation 4.46% (5/112) 5.21 0.0 2.1e-05
GO:0140098 catalytic activity, acting on RNA 6.25% (7/112) 4.07 0.0 2.9e-05
GO:0140101 catalytic activity, acting on a tRNA 4.46% (5/112) 4.52 3e-06 5e-05
GO:0006399 tRNA metabolic process 4.46% (5/112) 4.43 4e-06 6.3e-05
GO:0043167 ion binding 21.43% (24/112) 1.46 5e-06 7.1e-05
GO:0034641 cellular nitrogen compound metabolic process 11.61% (13/112) 2.2 5e-06 7.6e-05
GO:0000166 nucleotide binding 16.07% (18/112) 1.71 9e-06 0.000113
GO:1901265 nucleoside phosphate binding 16.07% (18/112) 1.71 9e-06 0.000113
GO:0006139 nucleobase-containing compound metabolic process 8.93% (10/112) 2.55 9e-06 0.000122
GO:0043168 anion binding 16.07% (18/112) 1.66 1.4e-05 0.000163
GO:0036094 small molecule binding 16.07% (18/112) 1.65 1.6e-05 0.000184
GO:0035639 purine ribonucleoside triphosphate binding 14.29% (16/112) 1.76 2e-05 0.000216
GO:0005488 binding 32.14% (36/112) 0.98 2.8e-05 0.000292
GO:0097159 organic cyclic compound binding 23.21% (26/112) 1.21 3.7e-05 0.00036
GO:1901363 heterocyclic compound binding 23.21% (26/112) 1.21 3.7e-05 0.00036
GO:0032555 purine ribonucleotide binding 14.29% (16/112) 1.67 4e-05 0.000373
GO:0032553 ribonucleotide binding 14.29% (16/112) 1.66 4.4e-05 0.00038
GO:0017076 purine nucleotide binding 14.29% (16/112) 1.66 4.3e-05 0.000384
GO:0097367 carbohydrate derivative binding 14.29% (16/112) 1.65 4.7e-05 0.000394
GO:0006520 cellular amino acid metabolic process 4.46% (5/112) 3.63 5.6e-05 0.000453
GO:0044281 small molecule metabolic process 6.25% (7/112) 2.54 0.000215 0.001677
GO:0005524 ATP binding 11.61% (13/112) 1.64 0.000284 0.002154
GO:0008144 drug binding 11.61% (13/112) 1.56 0.000469 0.003448
GO:0071949 FAD binding 1.79% (2/112) 5.84 0.00055 0.003718
GO:0032559 adenyl ribonucleotide binding 11.61% (13/112) 1.54 0.000531 0.003795
GO:0030554 adenyl nucleotide binding 11.61% (13/112) 1.54 0.00055 0.003816
GO:0044237 cellular metabolic process 16.96% (19/112) 1.17 0.000722 0.004752
GO:0006082 organic acid metabolic process 4.46% (5/112) 2.69 0.001113 0.006623
GO:0043436 oxoacid metabolic process 4.46% (5/112) 2.7 0.001096 0.00668
GO:0019752 carboxylic acid metabolic process 4.46% (5/112) 2.7 0.001096 0.00668
GO:0019898 extrinsic component of membrane 1.79% (2/112) 5.37 0.00107 0.006858
GO:0003676 nucleic acid binding 11.61% (13/112) 1.41 0.001236 0.007183
GO:0009654 photosystem II oxygen evolving complex 1.79% (2/112) 5.08 0.001604 0.009113
GO:0009987 cellular process 17.86% (20/112) 1.01 0.001969 0.010941
GO:1990204 oxidoreductase complex 1.79% (2/112) 4.89 0.002072 0.011021
GO:0003723 RNA binding 4.46% (5/112) 2.49 0.002051 0.011146
GO:0003674 molecular_function 41.07% (46/112) 0.54 0.002473 0.012879
GO:0016311 dephosphorylation 1.79% (2/112) 4.73 0.002597 0.01325
GO:0004655 porphobilinogen synthase activity 0.89% (1/112) 8.54 0.002694 0.013469
GO:0008152 metabolic process 21.43% (24/112) 0.85 0.002995 0.014683
GO:0009523 photosystem II 1.79% (2/112) 4.54 0.003384 0.016269
GO:0006790 sulfur compound metabolic process 1.79% (2/112) 4.29 0.004746 0.022386
GO:0009228 thiamine biosynthetic process 0.89% (1/112) 7.54 0.005381 0.022419
GO:0004832 valine-tRNA ligase activity 0.89% (1/112) 7.54 0.005381 0.022419
GO:0006438 valyl-tRNA aminoacylation 0.89% (1/112) 7.54 0.005381 0.022419
GO:0004366 glycerol-3-phosphate O-acyltransferase activity 0.89% (1/112) 7.54 0.005381 0.022419
GO:0042723 thiamine-containing compound metabolic process 0.89% (1/112) 7.54 0.005381 0.022419
GO:0042724 thiamine-containing compound biosynthetic process 0.89% (1/112) 7.54 0.005381 0.022419
GO:0006772 thiamine metabolic process 0.89% (1/112) 7.54 0.005381 0.022419
GO:0006396 RNA processing 2.68% (3/112) 2.94 0.007177 0.029415
GO:0009521 photosystem 1.79% (2/112) 3.92 0.007788 0.031402
GO:0004827 proline-tRNA ligase activity 0.89% (1/112) 6.95 0.00806 0.031484
GO:0006433 prolyl-tRNA aminoacylation 0.89% (1/112) 6.95 0.00806 0.031484
GO:0044436 thylakoid part 1.79% (2/112) 3.81 0.009062 0.034853
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_17 0.056 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_29 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_34 0.046 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_86 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_89 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_98 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_102 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_106 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_135 0.048 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_149 0.08 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_162 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.069 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_214 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_227 0.055 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_239 0.032 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_244 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_247 0.033 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_144 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_153 0.041 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_186 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.055 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_211 0.034 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_225 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_227 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_235 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_239 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.103 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_251 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_261 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_264 0.032 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_101 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_136 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_144 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_34 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_64 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.041 Archaeplastida Compare
Gingko biloba HCCA Cluster_111 0.053 Archaeplastida Compare
Gingko biloba HCCA Cluster_135 0.045 Archaeplastida Compare
Gingko biloba HCCA Cluster_151 0.063 Archaeplastida Compare
Gingko biloba HCCA Cluster_202 0.035 Archaeplastida Compare
Gingko biloba HCCA Cluster_245 0.106 Archaeplastida Compare
Gingko biloba HCCA Cluster_302 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_2 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_7 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_180 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_199 0.04 Archaeplastida Compare
Zea mays HCCA Cluster_208 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_232 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_268 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_6 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_41 0.046 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_65 0.091 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_83 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_114 0.046 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_133 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_145 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_19 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_20 0.127 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_32 0.05 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_53 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_108 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_160 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_199 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_207 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_224 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_245 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_260 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_53 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_65 0.048 Archaeplastida Compare
Picea abies HCCA Cluster_88 0.056 Archaeplastida Compare
Picea abies HCCA Cluster_101 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_227 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_266 0.035 Archaeplastida Compare
Picea abies HCCA Cluster_269 0.046 Archaeplastida Compare
Picea abies HCCA Cluster_292 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_341 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_354 0.053 Archaeplastida Compare
Picea abies HCCA Cluster_362 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_374 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_446 0.051 Archaeplastida Compare
Picea abies HCCA Cluster_454 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_456 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_465 0.049 Archaeplastida Compare
Oryza sativa HCCA Cluster_54 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_63 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_90 0.082 Archaeplastida Compare
Oryza sativa HCCA Cluster_114 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_139 0.064 Archaeplastida Compare
Oryza sativa HCCA Cluster_180 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_189 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_243 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_256 0.09 Archaeplastida Compare
Oryza sativa HCCA Cluster_271 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_308 0.035 Archaeplastida Compare
Oryza sativa HCCA Cluster_310 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.064 Archaeplastida Compare
Oryza sativa HCCA Cluster_327 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.065 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_25 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_32 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_36 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_40 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_100 0.073 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_103 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_106 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_150 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_220 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_32 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_33 0.085 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_110 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_125 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_160 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_211 0.109 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_224 0.043 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.086 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_271 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_283 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_35 0.033 Archaeplastida Compare
Vitis vinifera HCCA Cluster_52 0.11 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.068 Archaeplastida Compare
Vitis vinifera HCCA Cluster_104 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_105 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_124 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_143 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_155 0.034 Archaeplastida Compare
Vitis vinifera HCCA Cluster_162 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_178 0.06 Archaeplastida Compare
Vitis vinifera HCCA Cluster_218 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_236 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_245 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_22 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_25 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_33 0.043 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_56 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_61 0.023 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_65 0.03 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_85 0.038 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_129 0.021 Archaeplastida Compare
Sequences (112) (download table)

InterPro Domains

GO Terms

Family Terms