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  5. Zm00001e001915_P001

Zm00001e001915_P001


Description : no hits & (original description: none)


Gene families : OG0006547 (Archaeplastida) Phylogenetic Tree(s): OG0006547_tree ,
OG_05_0006205 (LandPlants) Phylogenetic Tree(s): OG_05_0006205_tree ,
OG_06_0008631 (SeedPlants) Phylogenetic Tree(s): OG_06_0008631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001915_P001
Cluster HCCA: Cluster_352

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00091p00165720 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AT4G36980 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.07 Archaeplastida
Cre12.g498350 No alias No description available 0.04 Archaeplastida
GSVIVT01022130001 No alias No description available 0.05 Archaeplastida
Gb_10092 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_10093 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10428744g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp8g03140.1 No alias no hits & (original description: none) 0.09 Archaeplastida
Pp3c11_20900V3.1 No alias No annotation 0.02 Archaeplastida
Smo68206 No alias No description available 0.03 Archaeplastida
Solyc02g090850.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
MF GO:0008193 tRNA guanylyltransferase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044599 AP-5 adaptor complex IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR019147 SWAP_N_domain 41 176
No external refs found!