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  5. AT3G08810

AT3G08810


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG0001235 (Archaeplastida) Phylogenetic Tree(s): OG0001235_tree ,
OG_05_0000768 (LandPlants) Phylogenetic Tree(s): OG_05_0000768_tree ,
OG_06_0000384 (SeedPlants) Phylogenetic Tree(s): OG_06_0000384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G08810
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G19930 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT1G60570 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT2G22030 No alias Galactose oxidase/kelch repeat superfamily protein 0.07 Archaeplastida
AT2G22060 No alias BEST Arabidopsis thaliana protein match is: Galactose... 0.04 Archaeplastida
AT2G41360 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT2G44030 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT2G45406 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G02310 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G11745 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT4G11750 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Archaeplastida
AT4G19250 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G19330 No alias Galactose oxidase/kelch repeat superfamily protein 0.08 Archaeplastida
AT4G23580 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT4G29370 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT4G33900 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 Archaeplastida
AT4G35120 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT4G39060 No alias BEST Arabidopsis thaliana protein match is: Galactose... 0.06 Archaeplastida
AT4G39290 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT4G39560 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Archaeplastida
AT4G39750 No alias F-box family protein-related 0.07 Archaeplastida
AT4G39756 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Archaeplastida
AT4G39760 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT5G02980 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida
AT5G02990 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT5G03000 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT5G03010 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT5G38670 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Archaeplastida
AT5G39560 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT5G48980 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 Archaeplastida
AT5G51250 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006869 lipid transport RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000706 meiotic DNA double-strand break processing IEP Neighborhood
BP GO:0000723 telomere maintenance IEP Neighborhood
BP GO:0000729 DNA double-strand break processing IEP Neighborhood
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0000987 proximal promoter sequence-specific DNA binding IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004108 citrate (Si)-synthase activity IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006266 DNA ligation IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0007140 male meiotic nuclear division IEP Neighborhood
BP GO:0009561 megagametogenesis IEP Neighborhood
BP GO:0016233 telomere capping IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032504 multicellular organism reproduction IEP Neighborhood
BP GO:0034086 maintenance of sister chromatid cohesion IEP Neighborhood
BP GO:0034090 maintenance of meiotic sister chromatid cohesion IEP Neighborhood
MF GO:0036440 citrate synthase activity IEP Neighborhood
MF GO:0042162 telomeric DNA binding IEP Neighborhood
MF GO:0043047 single-stranded telomeric DNA binding IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0048830 adventitious root development IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
MF GO:0098847 sequence-specific single stranded DNA binding IEP Neighborhood
BP GO:0140013 meiotic nuclear division IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 25 64
IPR011498 Kelch_2 126 168
No external refs found!