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  5. Zm00001e002598_P001

Zm00001e002598_P001


Description : no hits & (original description: none)


Gene families : OG0000112 (Archaeplastida) Phylogenetic Tree(s): OG0000112_tree ,
OG_05_0000097 (LandPlants) Phylogenetic Tree(s): OG_05_0000097_tree ,
OG_06_0001043 (SeedPlants) Phylogenetic Tree(s): OG_06_0001043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002598_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00257160 evm_27.TU.AmTr_v1... U-box domain-containing protein 25 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT2G35930 PUB23 plant U-box 23 0.03 Archaeplastida
AT3G11840 PUB24 plant U-box 24 0.02 Archaeplastida
AT3G52450 PUB22 plant U-box 22 0.02 Archaeplastida
LOC_Os01g64570.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os02g50460.1 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g34030.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os08g04470.1 No alias U-box domain-containing protein 8 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os10g03440.1 No alias U-box domain-containing protein 20 OS=Arabidopsis... 0.05 Archaeplastida
MA_10425865g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.04 Archaeplastida
MA_3784951g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_52661g0010 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 Archaeplastida
MA_7928010g0010 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.04 Archaeplastida
MA_95662g0020 No alias U-box domain-containing protein 27 OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g007010.2.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g007020.4.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g007040.4.1 No alias E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 Archaeplastida
Solyc01g107980.3.1 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e006484_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e007108_P001 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!