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  5. Zm00001e003146_P002

Zm00001e003146_P002


Description : transcription factor (WRKY)


Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000087 (LandPlants) Phylogenetic Tree(s): OG_05_0000087_tree ,
OG_06_0000067 (SeedPlants) Phylogenetic Tree(s): OG_06_0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003146_P002
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00016380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.05 Archaeplastida
AMTR_s00065p00201230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
AMTR_s00078p00171140 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
AMTR_s00088p00164440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.05 Archaeplastida
AMTR_s00156p00038330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
AT1G80840 ATWRKY40, WRKY40 WRKY DNA-binding protein 40 0.02 Archaeplastida
AT2G44745 No alias WRKY family transcription factor 0.03 Archaeplastida
AT2G47260 WRKY23, ATWRKY23 WRKY DNA-binding protein 23 0.03 Archaeplastida
AT3G04670 WRKY39, ATWRKY39 WRKY DNA-binding protein 39 0.03 Archaeplastida
AT4G04450 WRKY42, AtWRKY42 WRKY family transcription factor 0.03 Archaeplastida
AT4G39410 ATWRKY13, WRKY13 WRKY DNA-binding protein 13 0.03 Archaeplastida
AT5G07100 WRKY26 WRKY DNA-binding protein 26 0.03 Archaeplastida
AT5G41570 ATWRKY24, WRKY24 WRKY DNA-binding protein 24 0.02 Archaeplastida
GSVIVT01022067001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.02 Archaeplastida
GSVIVT01026969001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
GSVIVT01028129001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.04 Archaeplastida
GSVIVT01028244001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
GSVIVT01034148001 No alias RNA biosynthesis.transcriptional activation.WRKY... 0.03 Archaeplastida
LOC_Os01g47560.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
LOC_Os03g20550.1 No alias transcription factor (WRKY) 0.02 Archaeplastida
LOC_Os04g21950.1 No alias transcription factor (WRKY) 0.08 Archaeplastida
LOC_Os04g51560.1 No alias transcription factor (WRKY) 0.02 Archaeplastida
LOC_Os07g02060.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
MA_17107g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_22356g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp8g10640.1 No alias transcription factor (WRKY) 0.02 Archaeplastida
Pp3c14_17020V3.1 No alias WRKY DNA-binding protein 7 0.02 Archaeplastida
Pp3c17_19970V3.1 No alias WRKY DNA-binding protein 7 0.02 Archaeplastida
Pp3c7_7550V3.1 No alias WRKY DNA-binding protein 11 0.02 Archaeplastida
Solyc01g089960.3.1 No alias transcription factor (WRKY) 0.02 Archaeplastida
Solyc04g051540.3.1 No alias transcription factor (WRKY) 0.04 Archaeplastida
Solyc08g081630.2.1 No alias transcription factor (WRKY) 0.03 Archaeplastida
Zm00001e002033_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR003657 WRKY_dom 307 366
IPR018872 Zn-cluster-dom 255 303
No external refs found!