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  5. Zm00001e003182_P001

Zm00001e003182_P001


Description : no hits & (original description: none)


Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree ,
OG_06_0061392 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003182_P001
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00082380 evm_27.TU.AmTr_v1... BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00059p00084450 evm_27.TU.AmTr_v1... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00059p00097920 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00076p00180150 evm_27.TU.AmTr_v1... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00087p00099700 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00109p00021460 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G70370 PG2 polygalacturonase 2 0.02 Archaeplastida
AT5G25610 ATRD22, RD22 BURP domain-containing protein 0.03 Archaeplastida
GSVIVT01013718001 No alias Polygalacturonase 1 beta-like protein 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_01410 No alias non-catalytic polygalacturonase regulator 0.07 Archaeplastida
Gb_08843 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_24176 No alias BURP domain-containing protein 12 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Gb_32942 No alias non-catalytic polygalacturonase regulator 0.04 Archaeplastida
Gb_32944 No alias Polygalacturonase 1 beta-like protein 3 OS=Arabidopsis... 0.02 Archaeplastida
Gb_32947 No alias non-catalytic polygalacturonase regulator 0.02 Archaeplastida
Gb_39304 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os05g12400.1 No alias BURP domain-containing protein 1 OS=Oryza sativa subsp.... 0.05 Archaeplastida
LOC_Os06g13240.1 No alias BURP domain-containing protein 9 OS=Oryza sativa subsp.... 0.06 Archaeplastida
LOC_Os08g29200.1 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
LOC_Os08g38810.1 No alias BURP domain-containing protein 13 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os09g16010.1 No alias non-catalytic polygalacturonase regulator 0.02 Archaeplastida
MA_250203g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7645347g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c4_21630V3.1 No alias polygalacturonase 1 0.02 Archaeplastida
Solyc01g109500.4.1 No alias BURP domain protein USPL1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc02g062300.3.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.11 Archaeplastida
Solyc02g062310.1.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.08 Archaeplastida
Solyc05g005550.4.1 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
Solyc08g068130.1.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e003438_P003 No alias Protein RAFTIN 1A OS=Triticum aestivum... 0.03 Archaeplastida
Zm00001e019897_P001 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e033843_P001 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!