Zm00001e003329_P001

Description : RING-HC-class E3 ligase

Gene families : OG0000808 (Archaeplastida) Phylogenetic Tree(s): OG0000808_tree ,
OG_05_0000622 (LandPlants) Phylogenetic Tree(s): OG_05_0000622_tree ,
OG_06_0001983 (SeedPlants) Phylogenetic Tree(s): OG_06_0001983_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e003329_P001
Cluster	HCCA: Cluster_194

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00264430	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.04	Archaeplastida
AMTR_s00024p00165910	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.04	Archaeplastida
LOC_Os02g42690.3	No alias	RING-HC-class E3 ligase	0.04	Archaeplastida
LOC_Os04g44820.1	No alias	RING-HC-class E3 ligase	0.03	Archaeplastida
Solyc01g109340.4.1	No alias	RING-HC-class E3 ligase	0.04	Archaeplastida
Solyc10g008400.1.1	No alias	RING-HC-class E3 ligase	0.02	Archaeplastida
Zm00001e041298_P002	No alias	RING-HC-class E3 ligase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0008198	ferrous iron binding	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
BP	GO:0017003	protein-heme linkage	IEP	Neighborhood
BP	GO:0017004	cytochrome complex assembly	IEP	Neighborhood
BP	GO:0017006	protein-tetrapyrrole linkage	IEP	Neighborhood
MF	GO:0051287	NAD binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!