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  5. Zm00001e003366_P001

Zm00001e003366_P001


Description : splicing regulator kinase (PRP4K). protein kinase (DYRK)


Gene families : OG0005556 (Archaeplastida) Phylogenetic Tree(s): OG0005556_tree ,
OG_05_0005336 (LandPlants) Phylogenetic Tree(s): OG_05_0005336_tree ,
OG_06_0007239 (SeedPlants) Phylogenetic Tree(s): OG_06_0007239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003366_P001
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00104450 evm_27.TU.AmTr_v1... Protein modification.phosphorylation.CMGC kinase... 0.03 Archaeplastida
Cre06.g248850 No alias Protein modification.phosphorylation.CMGC kinase... 0.04 Archaeplastida
GSVIVT01011916001 No alias Protein modification.phosphorylation.CMGC kinase... 0.04 Archaeplastida
Mp3g09140.1 No alias splicing regulator kinase (PRP4K). protein kinase (DYRK) 0.03 Archaeplastida
Pp3c15_9260V3.1 No alias Protein kinase superfamily protein 0.02 Archaeplastida
Pp3c9_3840V3.1 No alias Protein kinase superfamily protein 0.02 Archaeplastida
Smo75107 No alias Protein modification.phosphorylation.CMGC kinase... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003684 damaged DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044599 AP-5 adaptor complex IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 619 932
No external refs found!