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  5. Zm00001e003414_P001

Zm00001e003414_P001


Description : transcription factor (DOF)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0025925 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003414_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00099150 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT1G28310 No alias Dof-type zinc finger DNA-binding family protein 0.06 Archaeplastida
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.04 Archaeplastida
GSVIVT01007992001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
GSVIVT01016887001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
LOC_Os03g60630.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os04g47990.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os07g13260.1 No alias transcription factor (DOF) 0.03 Archaeplastida
LOC_Os07g32510.1 No alias transcription factor (DOF) 0.02 Archaeplastida
LOC_Os12g38200.1 No alias transcription factor (DOF) 0.02 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.01 Archaeplastida
Pp3c12_22390V3.1 No alias cycling DOF factor 3 0.01 Archaeplastida
Pp3c13_2000V3.1 No alias cycling DOF factor 3 0.03 Archaeplastida
Pp3c15_3180V3.1 No alias cycling DOF factor 3 0.02 Archaeplastida
Pp3c17_7930V3.1 No alias cycling DOF factor 2 0.07 Archaeplastida
Solyc02g076850.2.1 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e001988_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e006190_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e009303_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e029641_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e034454_P001 No alias transcription factor (DOF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003851 Znf_Dof 45 96
No external refs found!