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  5. Zm00001e003571_P002

Zm00001e003571_P002


Description : transcription factor (SBP)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0001192 (LandPlants) Phylogenetic Tree(s): OG_05_0001192_tree ,
OG_06_0004431 (SeedPlants) Phylogenetic Tree(s): OG_06_0004431_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003571_P002
Cluster HCCA: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
AMTR_s00022p00106940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AMTR_s00045p00076020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AT1G20980 SPL1R2, ATSPL14,... squamosa promoter binding protein-like 14 0.04 Archaeplastida
Cre07.g325738 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01013452001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
LOC_Os11g30370.1 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_10049111g0010 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_10427464g0020 No alias Squamosa promoter-binding-like protein 14 OS=Arabidopsis... 0.02 Archaeplastida
MA_10429891g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10434066g0020 No alias Squamosa promoter-binding-like protein 15 OS=Oryza... 0.03 Archaeplastida
MA_16835g0010 No alias Squamosa promoter-binding-like protein 1 OS=Arabidopsis... 0.04 Archaeplastida
MA_20537g0010 No alias transcription factor (SBP) 0.02 Archaeplastida
MA_52027g0010 No alias transcription factor (SBP) 0.02 Archaeplastida
Mp1g13640.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Pp3c12_24350V3.1 No alias squamosa promoter binding protein-like 8 0.02 Archaeplastida
Pp3c14_18960V3.1 No alias squamosa promoter-binding protein-like 12 0.03 Archaeplastida
Pp3c25_8630V3.1 No alias squamosa promoter binding protein-like 2 0.02 Archaeplastida
Pp3c6_6900V3.1 No alias squamosa promoter binding protein-like 8 0.02 Archaeplastida
Smo79699 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Solyc02g077920.4.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Solyc05g015510.3.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e013761_P001 No alias transcription factor (SBP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
MF GO:0004484 mRNA guanylyltransferase activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008192 RNA guanylyltransferase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
MF GO:0070568 guanylyltransferase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR004333 SBP_dom 165 238
No external refs found!