Coexpression cluster: Cluster_329 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005669 transcription factor TFIID complex 6.38% (3/47) 8.79 0.0 5e-06
GO:0016070 RNA metabolic process 14.89% (7/47) 4.14 0.0 1.3e-05
GO:0090575 RNA polymerase II transcription factor complex 6.38% (3/47) 7.79 0.0 1.4e-05
GO:0044798 nuclear transcription factor complex 6.38% (3/47) 7.79 0.0 1.4e-05
GO:0090304 nucleic acid metabolic process 14.89% (7/47) 3.7 1e-06 3.4e-05
GO:0043170 macromolecule metabolic process 29.79% (14/47) 2.21 1e-06 3.5e-05
GO:0005667 transcription factor complex 6.38% (3/47) 6.91 2e-06 5.6e-05
GO:0006807 nitrogen compound metabolic process 29.79% (14/47) 2.07 3e-06 6.6e-05
GO:0006352 DNA-templated transcription, initiation 6.38% (3/47) 6.62 4e-06 8.2e-05
GO:0006139 nucleobase-containing compound metabolic process 14.89% (7/47) 3.29 7e-06 0.000129
GO:0032774 RNA biosynthetic process 8.51% (4/47) 4.98 8e-06 0.000141
GO:0006725 cellular aromatic compound metabolic process 14.89% (7/47) 3.09 1.6e-05 0.000241
GO:0046483 heterocycle metabolic process 14.89% (7/47) 3.1 1.6e-05 0.000252
GO:0044451 nucleoplasm part 6.38% (3/47) 5.82 2.1e-05 0.000269
GO:1901360 organic cyclic compound metabolic process 14.89% (7/47) 3.05 2e-05 0.000269
GO:0044238 primary metabolic process 29.79% (14/47) 1.78 2.8e-05 0.000332
GO:0044237 cellular metabolic process 27.66% (13/47) 1.87 3.2e-05 0.000352
GO:0009987 cellular process 29.79% (14/47) 1.75 3.8e-05 0.000399
GO:0071704 organic substance metabolic process 29.79% (14/47) 1.72 4.4e-05 0.000444
GO:0034654 nucleobase-containing compound biosynthetic process 8.51% (4/47) 4.01 0.000114 0.001081
GO:0034641 cellular nitrogen compound metabolic process 14.89% (7/47) 2.56 0.000164 0.001488
GO:0005488 binding 38.3% (18/47) 1.23 0.000251 0.002071
GO:0044428 nuclear part 6.38% (3/47) 4.65 0.000241 0.002079
GO:0018130 heterocycle biosynthetic process 8.51% (4/47) 3.64 0.000298 0.002263
GO:0019438 aromatic compound biosynthetic process 8.51% (4/47) 3.65 0.00029 0.002294
GO:0032991 protein-containing complex 12.77% (6/47) 2.61 0.000432 0.003155
GO:1901362 organic cyclic compound biosynthetic process 8.51% (4/47) 3.48 0.000457 0.003215
GO:0044422 organelle part 8.51% (4/47) 3.27 0.00079 0.005001
GO:0044446 intracellular organelle part 8.51% (4/47) 3.27 0.00079 0.005001
GO:0008152 metabolic process 29.79% (14/47) 1.32 0.000846 0.005186
GO:0006508 proteolysis 8.51% (4/47) 3.28 0.000766 0.005197
GO:0034508 centromere complex assembly 2.13% (1/47) 9.79 0.00113 0.006509
GO:0004000 adenosine deaminase activity 2.13% (1/47) 9.79 0.00113 0.006509
GO:0097159 organic cyclic compound binding 25.53% (12/47) 1.35 0.001892 0.010271
GO:1901363 heterocyclic compound binding 25.53% (12/47) 1.35 0.001892 0.010271
GO:0034450 ubiquitin-ubiquitin ligase activity 2.13% (1/47) 8.79 0.00226 0.011298
GO:0000776 kinetochore 2.13% (1/47) 8.79 0.00226 0.011298
GO:0003674 molecular_function 48.94% (23/47) 0.79 0.002165 0.011427
GO:0009059 macromolecule biosynthetic process 8.51% (4/47) 2.77 0.00282 0.013738
GO:0019941 modification-dependent protein catabolic process 4.26% (2/47) 4.58 0.003208 0.013851
GO:0043632 modification-dependent macromolecule catabolic process 4.26% (2/47) 4.58 0.003208 0.013851
GO:0006511 ubiquitin-dependent protein catabolic process 4.26% (2/47) 4.58 0.003208 0.013851
GO:0008150 biological_process 36.17% (17/47) 0.98 0.003029 0.014036
GO:0044424 intracellular part 12.77% (6/47) 2.06 0.002992 0.014213
GO:0003714 transcription corepressor activity 2.13% (1/47) 8.2 0.003388 0.014303
GO:0044464 cell part 12.77% (6/47) 2.0 0.003656 0.01478
GO:0140096 catalytic activity, acting on a protein 14.89% (7/47) 1.8 0.003629 0.014991
GO:0003676 nucleic acid binding 14.89% (7/47) 1.77 0.004088 0.016182
GO:0044265 cellular macromolecule catabolic process 4.26% (2/47) 4.35 0.004402 0.017067
GO:0044271 cellular nitrogen compound biosynthetic process 8.51% (4/47) 2.55 0.004799 0.018237
GO:0051603 proteolysis involved in cellular protein catabolic process 4.26% (2/47) 4.25 0.005012 0.018671
GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 2.13% (1/47) 7.47 0.00564 0.020218
GO:0019239 deaminase activity 2.13% (1/47) 7.47 0.00564 0.020218
GO:1901564 organonitrogen compound metabolic process 17.02% (8/47) 1.5 0.006428 0.022616
GO:0043015 gamma-tubulin binding 2.13% (1/47) 7.2 0.006764 0.023367
GO:0070011 peptidase activity, acting on L-amino acid peptides 6.38% (3/47) 2.93 0.007237 0.024123
GO:0070647 protein modification by small protein conjugation or removal 4.26% (2/47) 3.98 0.007184 0.024373
GO:0000151 ubiquitin ligase complex 2.13% (1/47) 6.98 0.007887 0.025399
GO:0009057 macromolecule catabolic process 4.26% (2/47) 3.89 0.008073 0.025566
GO:0008233 peptidase activity 6.38% (3/47) 2.88 0.007877 0.025804
GO:0019538 protein metabolic process 14.89% (7/47) 1.56 0.008734 0.027205
GO:0044260 cellular macromolecule metabolic process 14.89% (7/47) 1.52 0.010387 0.031832
GO:0006396 RNA processing 4.26% (2/47) 3.61 0.011784 0.035538
GO:0004175 endopeptidase activity 4.26% (2/47) 3.49 0.013704 0.040685
GO:0044248 cellular catabolic process 4.26% (2/47) 3.36 0.016282 0.047594
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_33 0.034 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_119 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_197 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_213 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_220 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_221 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_233 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_241 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_248 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_37 0.03 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_133 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_194 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_213 0.029 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_243 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_246 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_250 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_252 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_255 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_259 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_175 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_107 0.029 Archaeplastida Compare
Gingko biloba HCCA Cluster_131 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_140 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_216 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_304 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_306 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_285 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_357 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_363 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_367 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_22 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_132 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_149 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_156 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_166 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_111 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_146 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_208 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_264 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_267 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_284 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_300 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_92 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_245 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_294 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_295 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_318 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_328 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_359 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_393 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_447 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_492 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_513 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_517 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_522 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_526 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_40 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_214 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_219 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_273 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_296 0.042 Archaeplastida Compare
Oryza sativa HCCA Cluster_297 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_312 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_348 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_350 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_359 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_201 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_46 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_131 0.043 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_134 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_139 0.034 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_223 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_259 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_26 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_164 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_189 0.035 Archaeplastida Compare
Vitis vinifera HCCA Cluster_197 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_246 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_249 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_23 0.029 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_50 0.023 Archaeplastida Compare
Sequences (47) (download table)

InterPro Domains

GO Terms

Family Terms