Description : transcription factor (MADS/AGL)
Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e003670_P002 | |
Cluster | HCCA: Cluster_212 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00066p00109320 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | Archaeplastida | |
AMTR_s00071p00198970 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | Archaeplastida | |
AT1G77950 | AGL67 | AGAMOUS-like 67 | 0.02 | Archaeplastida | |
AT2G45650 | AGL6 | AGAMOUS-like 6 | 0.03 | Archaeplastida | |
AT3G58780 | AGL1, SHP1 | K-box region and MADS-box transcription factor family protein | 0.04 | Archaeplastida | |
AT5G15800 | AGL2, SEP1 | K-box region and MADS-box transcription factor family protein | 0.03 | Archaeplastida | |
GSVIVT01008140001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | Archaeplastida | |
GSVIVT01015649001 | No alias | No description available | 0.04 | Archaeplastida | |
GSVIVT01018446001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.05 | Archaeplastida | |
GSVIVT01025945001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | Archaeplastida | |
GSVIVT01027579001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.05 | Archaeplastida | |
GSVIVT01035477001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | Archaeplastida | |
Gb_03068 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
MA_458668g0010 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
Pp3c12_22890V3.1 | No alias | AGAMOUS-like 66 | 0.02 | Archaeplastida | |
Pp3c16_19170V3.1 | No alias | AGAMOUS-like 61 | 0.02 | Archaeplastida | |
Pp3c17_13070V3.1 | No alias | AGAMOUS-like 66 | 0.02 | Archaeplastida | |
Pp3c3_31770V3.1 | No alias | AGAMOUS-like 104 | 0.02 | Archaeplastida | |
Pp3c4_3820V3.1 | No alias | AGAMOUS-like 66 | 0.02 | Archaeplastida | |
Pp3c9_1370V3.1 | No alias | AGAMOUS-like 66 | 0.02 | Archaeplastida | |
Solyc02g065730.2.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Neighborhood |
MF | GO:0004180 | carboxypeptidase activity | IEP | Neighborhood |
MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Neighborhood |
MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
MF | GO:0008238 | exopeptidase activity | IEP | Neighborhood |
BP | GO:0009250 | glucan biosynthetic process | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
MF | GO:0016759 | cellulose synthase activity | IEP | Neighborhood |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Neighborhood |
BP | GO:0030163 | protein catabolic process | IEP | Neighborhood |
BP | GO:0030243 | cellulose metabolic process | IEP | Neighborhood |
BP | GO:0030244 | cellulose biosynthetic process | IEP | Neighborhood |
CC | GO:0031012 | extracellular matrix | IEP | Neighborhood |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Neighborhood |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Neighborhood |
MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
CC | GO:0044421 | extracellular region part | IEP | Neighborhood |
BP | GO:0051273 | beta-glucan metabolic process | IEP | Neighborhood |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Neighborhood |
MF | GO:0070008 | serine-type exopeptidase activity | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002100 | TF_MADSbox | 27 | 74 |
No external refs found! |