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  5. Zm00001e003949_P001

Zm00001e003949_P001


Description : no hits & (original description: none)


Gene families : OG0000108 (Archaeplastida) Phylogenetic Tree(s): OG0000108_tree ,
OG_05_0000044 (LandPlants) Phylogenetic Tree(s): OG_05_0000044_tree ,
OG_06_0002750 (SeedPlants) Phylogenetic Tree(s): OG_06_0002750_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003949_P001
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00249780 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 Archaeplastida
AMTR_s00016p00253110 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
AMTR_s00021p00031000 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
AMTR_s00021p00178750 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.04 Archaeplastida
AMTR_s00021p00178980 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
AMTR_s00022p00166050 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
AMTR_s00049p00133800 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.06 Archaeplastida
AMTR_s00061p00214890 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.06 Archaeplastida
AMTR_s00061p00215070 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.06 Archaeplastida
AMTR_s00061p00215230 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.05 Archaeplastida
AMTR_s00061p00215400 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
AMTR_s00061p00215860 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00090p00106390 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 Archaeplastida
AMTR_s00374p00005120 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.05 Archaeplastida
AMTR_s01332p00008900 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
AT1G06260 No alias Cysteine proteinases superfamily protein 0.05 Archaeplastida
AT1G20850 XCP2 xylem cysteine peptidase 2 0.04 Archaeplastida
AT1G29080 No alias Papain family cysteine protease 0.04 Archaeplastida
AT1G29090 No alias Cysteine proteinases superfamily protein 0.04 Archaeplastida
AT1G47128 RD21, RD21A Granulin repeat cysteine protease family protein 0.03 Archaeplastida
AT2G22160 No alias Cysteine proteinases superfamily protein 0.01 Archaeplastida
AT2G34080 No alias Cysteine proteinases superfamily protein 0.02 Archaeplastida
AT3G19390 No alias Granulin repeat cysteine protease family protein 0.02 Archaeplastida
AT3G49340 No alias Cysteine proteinases superfamily protein 0.02 Archaeplastida
AT4G23520 No alias Cysteine proteinases superfamily protein 0.06 Archaeplastida
AT4G35350 XCP1 xylem cysteine peptidase 1 0.04 Archaeplastida
AT4G36880 CP1 cysteine proteinase1 0.06 Archaeplastida
AT5G43060 No alias Granulin repeat cysteine protease family protein 0.03 Archaeplastida
AT5G45890 SAG12 senescence-associated gene 12 0.05 Archaeplastida
AT5G50260 No alias Cysteine proteinases superfamily protein 0.07 Archaeplastida
Cre05.g247851 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01000582001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 Archaeplastida
GSVIVT01007585001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
GSVIVT01009796001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01013420001 No alias Protein degradation.peptidase families.cysteine-type... 0.02 Archaeplastida
GSVIVT01020657001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01020698001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
GSVIVT01021223001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01023863001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
Gb_10444 No alias protease (Papain) 0.08 Archaeplastida
Gb_12857 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_19399 No alias Prgrammed Cell Death cysteine protease (XCP) 0.05 Archaeplastida
Gb_31936 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_34744 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g67980.1 No alias protease (Papain) 0.04 Archaeplastida
LOC_Os01g73980.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.03 Archaeplastida
LOC_Os04g12660.1 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.05 Archaeplastida
LOC_Os04g13090.1 No alias protease (Papain) 0.05 Archaeplastida
LOC_Os04g13140.1 No alias protease (Papain) 0.03 Archaeplastida
LOC_Os04g55650.1 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os05g01810.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.05 Archaeplastida
LOC_Os08g44270.1 No alias protease (Papain) 0.08 Archaeplastida
LOC_Os09g32230.1 No alias Senescence-specific cysteine protease SAG12... 0.06 Archaeplastida
LOC_Os09g38920.1 No alias Senescence-specific cysteine protease SAG12... 0.03 Archaeplastida
LOC_Os11g14900.4 No alias protease (Papain) 0.02 Archaeplastida
LOC_Os12g17540.1 No alias protease (Papain) 0.05 Archaeplastida
MA_10425982g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10429635g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_34759g0010 No alias Thiol protease SEN102 OS=Hemerocallis sp.... 0.02 Archaeplastida
MA_36514g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
Mp1g01840.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.06 Archaeplastida
Mp1g03230.1 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.01 Archaeplastida
Mp6g12320.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.04 Archaeplastida
Pp3c19_6730V3.1 No alias Granulin repeat cysteine protease family protein 0.03 Archaeplastida
Pp3c23_20820V3.1 No alias Granulin repeat cysteine protease family protein 0.03 Archaeplastida
Pp3c8_20370V3.1 No alias Granulin repeat cysteine protease family protein 0.02 Archaeplastida
Smo139792 No alias Caricain OS=Carica papaya 0.03 Archaeplastida
Smo230602 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 Archaeplastida
Solyc02g076980.5.1.1 No alias Senescence-specific cysteine protease SAG12... 0.03 Archaeplastida
Solyc02g077040.4.1 No alias Senescence-specific cysteine protease SAG12... 0.04 Archaeplastida
Solyc03g006210.2.1 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.02 Archaeplastida
Solyc03g111730.3.1 No alias protease (Papain) 0.05 Archaeplastida
Solyc04g078540.4.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.01 Archaeplastida
Solyc04g082710.4.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.03 Archaeplastida
Solyc07g053460.4.1 No alias Senescence-specific cysteine protease SAG12... 0.04 Archaeplastida
Solyc12g088670.2.1 No alias Low-temperature-induced cysteine proteinase (Fragment)... 0.03 Archaeplastida
Solyc12g094700.3.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.06 Archaeplastida
Zm00001e010091_P001 No alias Senescence-specific cysteine protease SAG12... 0.06 Archaeplastida
Zm00001e021376_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e028260_P001 No alias Cysteine protease XCP2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e029667_P001 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.04 Archaeplastida
Zm00001e030283_P001 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004097 catechol oxidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!