Description : Ribosomal S17 family protein
Gene families : OG0002265 (Archaeplastida) Phylogenetic Tree(s): OG0002265_tree ,
OG_05_0002018 (LandPlants) Phylogenetic Tree(s): OG_05_0002018_tree ,
OG_06_0002044 (SeedPlants) Phylogenetic Tree(s): OG_06_0002044_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT3G10610 | |
Cluster | HCCA: Cluster_134 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00030p00243530 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.26 | Archaeplastida | |
AT2G04390 | No alias | Ribosomal S17 family protein | 0.09 | Archaeplastida | |
Cre12.g498250 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.29 | Archaeplastida | |
GSVIVT01033920001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.08 | Archaeplastida | |
GSVIVT01034653001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.16 | Archaeplastida | |
LOC_Os03g01900.1 | No alias | component RPS17 of SSU proteome | 0.11 | Archaeplastida | |
LOC_Os10g27190.1 | No alias | component RPS17 of SSU proteome | 0.11 | Archaeplastida | |
MA_184894g0010 | No alias | component RPS17 of SSU proteome | 0.37 | Archaeplastida | |
MA_217540g0010 | No alias | component RPS17 of SSU proteome | 0.04 | Archaeplastida | |
Mp8g18950.1 | No alias | component RPS17 of SSU proteome | 0.4 | Archaeplastida | |
Pp3c11_2530V3.1 | No alias | Ribosomal S17 family protein | 0.3 | Archaeplastida | |
Pp3c11_2540V3.1 | No alias | Ribosomal S17 family protein | 0.29 | Archaeplastida | |
Pp3c2_34780V3.1 | No alias | Ribosomal S17 family protein | 0.22 | Archaeplastida | |
Pp3c7_21070V3.1 | No alias | Ribosomal S17 family protein | 0.07 | Archaeplastida | |
Pp3c7_21140V3.1 | No alias | Ribosomal S17 family protein | 0.36 | Archaeplastida | |
Smo270936 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.15 | Archaeplastida | |
Solyc05g055230.2.1 | No alias | component RPS17 of SSU proteome | 0.37 | Archaeplastida | |
Solyc10g150146.1.1 | No alias | component RPS17 of SSU proteome | 0.37 | Archaeplastida | |
Solyc11g006690.1.1 | No alias | component RPS17 of SSU proteome | 0.22 | Archaeplastida | |
Zm00001e030769_P001 | No alias | component RPS17 of SSU proteome | 0.13 | Archaeplastida | |
Zm00001e036233_P001 | No alias | component RPS17 of SSU proteome | 0.14 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000028 | ribosomal small subunit assembly | IBA | Interproscan |
BP | GO:0001510 | RNA methylation | RCA | Interproscan |
MF | GO:0003735 | structural constituent of ribosome | ISS | Interproscan |
CC | GO:0005737 | cytoplasm | ISM | Interproscan |
CC | GO:0005840 | ribosome | ISS | Interproscan |
BP | GO:0006164 | purine nucleotide biosynthetic process | RCA | Interproscan |
BP | GO:0006412 | translation | ISS | Interproscan |
BP | GO:0006414 | translational elongation | IBA | Interproscan |
BP | GO:0009165 | nucleotide biosynthetic process | RCA | Interproscan |
CC | GO:0022626 | cytosolic ribosome | IDA | Interproscan |
CC | GO:0022627 | cytosolic small ribosomal subunit | IDA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000036 | acyl carrier activity | IEP | Neighborhood |
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0004526 | ribonuclease P activity | IEP | Neighborhood |
MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Neighborhood |
MF | GO:0004550 | nucleoside diphosphate kinase activity | IEP | Neighborhood |
CC | GO:0005618 | cell wall | IEP | Neighborhood |
CC | GO:0005622 | intracellular | IEP | Neighborhood |
CC | GO:0005730 | nucleolus | IEP | Neighborhood |
CC | GO:0005742 | mitochondrial outer membrane translocase complex | IEP | Neighborhood |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Neighborhood |
CC | GO:0005758 | mitochondrial intermembrane space | IEP | Neighborhood |
CC | GO:0005763 | mitochondrial small ribosomal subunit | IEP | Neighborhood |
CC | GO:0005773 | vacuole | IEP | Neighborhood |
CC | GO:0005774 | vacuolar membrane | IEP | Neighborhood |
CC | GO:0005829 | cytosol | IEP | Neighborhood |
CC | GO:0005886 | plasma membrane | IEP | Neighborhood |
CC | GO:0005911 | cell-cell junction | IEP | Neighborhood |
BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Neighborhood |
BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006479 | protein methylation | IEP | Neighborhood |
BP | GO:0006626 | protein targeting to mitochondrion | IEP | Neighborhood |
BP | GO:0006839 | mitochondrial transport | IEP | Neighborhood |
MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
BP | GO:0008213 | protein alkylation | IEP | Neighborhood |
MF | GO:0008320 | protein transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
BP | GO:0009218 | pyrimidine ribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009220 | pyrimidine ribonucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Neighborhood |
CC | GO:0009506 | plasmodesma | IEP | Neighborhood |
CC | GO:0009507 | chloroplast | IEP | Neighborhood |
CC | GO:0009536 | plastid | IEP | Neighborhood |
BP | GO:0009664 | plant-type cell wall organization | IEP | Neighborhood |
BP | GO:0009735 | response to cytokinin | IEP | Neighborhood |
BP | GO:0009909 | regulation of flower development | IEP | Neighborhood |
BP | GO:0009955 | adaxial/abaxial pattern specification | IEP | Neighborhood |
BP | GO:0009965 | leaf morphogenesis | IEP | Neighborhood |
BP | GO:0010015 | root morphogenesis | IEP | Neighborhood |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015450 | P-P-bond-hydrolysis-driven protein transmembrane transporter activity | IEP | Neighborhood |
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
MF | GO:0016018 | cyclosporin A binding | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
BP | GO:0016570 | histone modification | IEP | Neighborhood |
BP | GO:0016571 | histone methylation | IEP | Neighborhood |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Neighborhood |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Neighborhood |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Neighborhood |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
CC | GO:0019866 | organelle inner membrane | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
CC | GO:0022625 | cytosolic large ribosomal subunit | IEP | Neighborhood |
MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | Neighborhood |
CC | GO:0030054 | cell junction | IEP | Neighborhood |
CC | GO:0030312 | external encapsulating structure | IEP | Neighborhood |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Neighborhood |
CC | GO:0030684 | preribosome | IEP | Neighborhood |
CC | GO:0030686 | 90S preribosome | IEP | Neighborhood |
CC | GO:0031090 | organelle membrane | IEP | Neighborhood |
CC | GO:0031966 | mitochondrial membrane | IEP | Neighborhood |
CC | GO:0031970 | organelle envelope lumen | IEP | Neighborhood |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
BP | GO:0032870 | cellular response to hormone stimulus | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
BP | GO:0034644 | cellular response to UV | IEP | Neighborhood |
BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
BP | GO:0034968 | histone lysine methylation | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0042274 | ribosomal small subunit biogenesis | IEP | Neighborhood |
BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
MF | GO:0042887 | amide transmembrane transporter activity | IEP | Neighborhood |
CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
CC | GO:0044437 | vacuolar part | IEP | Neighborhood |
MF | GO:0044620 | ACP phosphopantetheine attachment site binding | IEP | Neighborhood |
BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Neighborhood |
BP | GO:0048364 | root development | IEP | Neighborhood |
BP | GO:0048367 | shoot system development | IEP | Neighborhood |
BP | GO:0048569 | post-embryonic animal organ development | IEP | Neighborhood |
BP | GO:0048731 | system development | IEP | Neighborhood |
MF | GO:0051192 | prosthetic group binding | IEP | Neighborhood |
CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
BP | GO:0070585 | protein localization to mitochondrion | IEP | Neighborhood |
BP | GO:0071215 | cellular response to abscisic acid stimulus | IEP | Neighborhood |
BP | GO:0071310 | cellular response to organic substance | IEP | Neighborhood |
BP | GO:0071396 | cellular response to lipid | IEP | Neighborhood |
BP | GO:0071433 | cell wall repair | IEP | Neighborhood |
BP | GO:0071493 | cellular response to UV-B | IEP | Neighborhood |
BP | GO:0071495 | cellular response to endogenous stimulus | IEP | Neighborhood |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
BP | GO:0071669 | plant-type cell wall organization or biogenesis | IEP | Neighborhood |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Neighborhood |
BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Neighborhood |
BP | GO:0097306 | cellular response to alcohol | IEP | Neighborhood |
CC | GO:0098588 | bounding membrane of organelle | IEP | Neighborhood |
CC | GO:0098799 | outer mitochondrial membrane protein complex | IEP | Neighborhood |
CC | GO:0098805 | whole membrane | IEP | Neighborhood |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Neighborhood |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Neighborhood |
MF | GO:1904680 | peptide transmembrane transporter activity | IEP | Neighborhood |
BP | GO:1905392 | plant organ morphogenesis | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001210 | Ribosomal_S17e | 1 | 120 |
No external refs found! |