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  5. Zm00001e004396_P001

Zm00001e004396_P001


Description : transcription factor (YABBY)


Gene families : OG0000890 (Archaeplastida) Phylogenetic Tree(s): OG0000890_tree ,
OG_05_0006725 (LandPlants) Phylogenetic Tree(s): OG_05_0006725_tree ,
OG_06_0004255 (SeedPlants) Phylogenetic Tree(s): OG_06_0004255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004396_P001
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00199030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AMTR_s00085p00032940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.05 Archaeplastida
LOC_Os02g42950.1 No alias transcription factor (YABBY) 0.06 Archaeplastida
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.02 Archaeplastida
MA_407206g0010 No alias transcription factor (YABBY) 0.04 Archaeplastida
Solyc01g010240.3.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.08 Archaeplastida
Solyc06g073920.3.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
Solyc08g079100.3.1 No alias transcription factor (YABBY) 0.06 Archaeplastida
Solyc11g071810.2.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e035310_P003 No alias transcription factor (YABBY) 0.08 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006780 YABBY 46 278
No external refs found!