1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G10900

AT3G10900


Description : Glycosyl hydrolase superfamily protein


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree ,
OG_06_0019943 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G10900
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00158370 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
AMTR_s00011p00202020 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
GSVIVT01037212001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
Gb_29706 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
LOC_Os01g47400.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_10433157g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_110162g0010 No alias endo-beta-1,4-mannanase 0.05 Archaeplastida
MA_6558g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Mp8g13360.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Pp3c13_12000V3.1 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
Pp3c6_26420V3.1 No alias Glycosyl hydrolase superfamily protein 0.03 Archaeplastida
Smo101525 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Smo234867 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.03 Archaeplastida
Zm00001e019799_P001 No alias No annotation 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0005496 steroid binding IEP Neighborhood
BP GO:0007267 cell-cell signaling IEP Neighborhood
MF GO:0008142 oxysterol binding IEP Neighborhood
BP GO:0010160 formation of animal organ boundary IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
BP GO:0023052 signaling IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0031221 arabinan metabolic process IEP Neighborhood
BP GO:0031222 arabinan catabolic process IEP Neighborhood
MF GO:0032934 sterol binding IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044403 symbiont process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
BP GO:0048446 petal morphogenesis IEP Neighborhood
BP GO:0048859 formation of anatomical boundary IEP Neighborhood
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 66 331
No external refs found!