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  5. Zm00001e004475_P001

Zm00001e004475_P001


Description : light-dependent protochlorophyllide oxidoreductase


Gene families : OG0003183 (Archaeplastida) Phylogenetic Tree(s): OG0003183_tree ,
OG_05_0003239 (LandPlants) Phylogenetic Tree(s): OG_05_0003239_tree ,
OG_06_0003199 (SeedPlants) Phylogenetic Tree(s): OG_06_0003199_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004475_P001
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268600 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.04 Archaeplastida
AT1G03630 POR C, PORC protochlorophyllide oxidoreductase C 0.03 Archaeplastida
Cre01.g015350 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.07 Archaeplastida
GSVIVT01014388001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 Archaeplastida
GSVIVT01030386001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 Archaeplastida
Gb_29310 No alias light-dependent protochlorophyllide oxidoreductase 0.06 Archaeplastida
LOC_Os04g58200.1 No alias light-dependent protochlorophyllide oxidoreductase 0.04 Archaeplastida
LOC_Os10g35370.1 No alias light-dependent protochlorophyllide oxidoreductase 0.06 Archaeplastida
MA_10433385g0020 No alias light-dependent protochlorophyllide oxidoreductase 0.02 Archaeplastida
MA_91782g0010 No alias light-dependent protochlorophyllide oxidoreductase 0.03 Archaeplastida
Mp8g17840.1 No alias light-dependent protochlorophyllide oxidoreductase 0.11 Archaeplastida
Pp3c12_20650V3.1 No alias protochlorophyllide oxidoreductase A 0.06 Archaeplastida
Pp3c4_8470V3.1 No alias protochlorophyllide oxidoreductase A 0.03 Archaeplastida
Smo142334 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.07 Archaeplastida
Solyc07g054210.3.1 No alias light-dependent protochlorophyllide oxidoreductase 0.05 Archaeplastida
Solyc10g006900.3.1 No alias light-dependent protochlorophyllide oxidoreductase 0.04 Archaeplastida
Solyc12g013710.2.1 No alias light-dependent protochlorophyllide oxidoreductase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002347 SDR_fam 85 228
No external refs found!