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  5. Zm00001e004865_P001

Zm00001e004865_P001


Description : 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica (sp|q0dv32|4cll1_orysj : 746.0)


Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0000459 (LandPlants) Phylogenetic Tree(s): OG_05_0000459_tree ,
OG_06_0003208 (SeedPlants) Phylogenetic Tree(s): OG_06_0003208_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e004865_P001
Cluster HCCA: Cluster_330

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00239750 evm_27.TU.AmTr_v1... Phytohormones.jasmonic acid.synthesis.OPC-8:CoA synthetase 0.02 Archaeplastida
AMTR_s00048p00101790 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 Archaeplastida
AMTR_s00049p00100040 evm_27.TU.AmTr_v1... 4-coumarate--CoA ligase-like 5 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AT1G20510 OPCL1 OPC-8:0 CoA ligase1 0.03 Archaeplastida
AT3G21240 AT4CL2, 4CL2 4-coumarate:CoA ligase 2 0.03 Archaeplastida
GSVIVT01010497001 No alias Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase 0.03 Archaeplastida
GSVIVT01024400001 No alias 4-coumarate--CoA ligase 2 OS=Glycine max 0.05 Archaeplastida
Gb_08075 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_41091 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
LOC_Os02g08100.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
LOC_Os04g24530.1 No alias acyl-CoA synthetase (ACS5) 0.02 Archaeplastida
LOC_Os06g44620.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
LOC_Os08g34790.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
MA_109119g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
Mp5g01200.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 Archaeplastida
Pp3c22_15350V3.1 No alias 4-coumarate:CoA ligase 3 0.03 Archaeplastida
Pp3c22_9050V3.1 No alias OPC-8:0 CoA ligase1 0.03 Archaeplastida
Pp3c3_37980V3.1 No alias acyl-CoA synthetase 5 0.02 Archaeplastida
Smo123905 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 Archaeplastida
Smo171251 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 Archaeplastida
Smo173133 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 Archaeplastida
Smo177393 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 Archaeplastida
Smo177466 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo232017 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 Archaeplastida
Solyc03g097030.3.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 Archaeplastida
Solyc03g111170.3.1 No alias 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g117870.3.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
Solyc06g068650.4.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
Zm00001e013798_P002 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
Zm00001e023286_P002 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003997 acyl-CoA oxidase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005244 voltage-gated ion channel activity IEP Neighborhood
MF GO:0005247 voltage-gated chloride channel activity IEP Neighborhood
MF GO:0005253 anion channel activity IEP Neighborhood
MF GO:0005254 chloride channel activity IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006821 chloride transport IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008308 voltage-gated anion channel activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015108 chloride transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0022832 voltage-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 460 535
IPR000873 AMP-dep_Synth/Lig 40 451
No external refs found!