Zm00001e005004_P001

Description : component NF-YA of NF-Y transcription factor complex

Gene families : OG0000500 (Archaeplastida) Phylogenetic Tree(s): OG0000500_tree ,
OG_05_0000477 (LandPlants) Phylogenetic Tree(s): OG_05_0000477_tree ,
OG_06_0006367 (SeedPlants) Phylogenetic Tree(s): OG_06_0006367_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e005004_P001
Cluster	HCCA: Cluster_150

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00174960	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NF-Y...	0.07	Archaeplastida
AMTR_s00048p00192930	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NF-Y...	0.05	Archaeplastida
AMTR_s00103p00144230	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NF-Y...	0.04	Archaeplastida
AT1G72830	HAP2C, NF-YA3, ATHAP2C	nuclear factor Y, subunit A3	0.05	Archaeplastida
AT5G06510	NF-YA10	nuclear factor Y, subunit A10	0.03	Archaeplastida
Cpa\|evm.model.tig00021038.83	No alias	RNA biosynthesis.transcriptional activation.NF-Y...	0.02	Archaeplastida
GSVIVT01016790001	No alias	RNA biosynthesis.transcriptional activation.NF-Y...	0.02	Archaeplastida
GSVIVT01022601001	No alias	RNA biosynthesis.transcriptional activation.NF-Y...	0.08	Archaeplastida
Gb_31427	No alias	component NF-YA of NF-Y transcription factor complex	0.03	Archaeplastida
Gb_32705	No alias	no hits & (original description: none)	0.02	Archaeplastida
LOC_Os03g07880.1	No alias	component NF-YA of NF-Y transcription factor complex	0.03	Archaeplastida
LOC_Os03g44540.1	No alias	component NF-YA of NF-Y transcription factor complex	0.03	Archaeplastida
LOC_Os12g42400.2	No alias	component NF-YA of NF-Y transcription factor complex	0.06	Archaeplastida
MA_10431570g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_17313g0010	No alias	component NF-YA of NF-Y transcription factor complex	0.05	Archaeplastida
MA_60139g0010	No alias	component NF-YA of NF-Y transcription factor complex	0.02	Archaeplastida
MA_608139g0010	No alias	component NF-YA of NF-Y transcription factor complex	0.02	Archaeplastida
MA_72133g0010	No alias	component NF-YA of NF-Y transcription factor complex	0.05	Archaeplastida
Pp3c7_7470V3.1	No alias	nuclear factor Y, subunit A7	0.04	Archaeplastida
Solyc08g062210.3.1	No alias	component NF-YA of NF-Y transcription factor complex	0.03	Archaeplastida
Solyc12g009050.3.1	No alias	component NF-YA of NF-Y transcription factor complex	0.02	Archaeplastida
Zm00001e001966_P001	No alias	component NF-YA of NF-Y transcription factor complex	0.05	Archaeplastida
Zm00001e003228_P001	No alias	component NF-YA of NF-Y transcription factor complex	0.03	Archaeplastida
Zm00001e003259_P001	No alias	component NF-YA of NF-Y transcription factor complex	0.05	Archaeplastida
Zm00001e005342_P003	No alias	component NF-YA of NF-Y transcription factor complex	0.03	Archaeplastida
Zm00001e012396_P001	No alias	component NF-YA of NF-Y transcription factor complex	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005575	cellular_component	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
BP	GO:0005984	disaccharide metabolic process	IEP	Neighborhood
BP	GO:0005991	trehalose metabolic process	IEP	Neighborhood
BP	GO:0005992	trehalose biosynthetic process	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
BP	GO:0009311	oligosaccharide metabolic process	IEP	Neighborhood
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043227	membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
CC	GO:0044424	intracellular part	IEP	Neighborhood
CC	GO:0044464	cell part	IEP	Neighborhood
BP	GO:0046351	disaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001289	NFYA	167	221

External Links

No external refs found!

Zm00001e005004_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation