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  5. Zm00001e005030_P001

Zm00001e005030_P001


Description : cationic amino acid transporter (CAT)


Gene families : OG0000547 (Archaeplastida) Phylogenetic Tree(s): OG0000547_tree ,
OG_05_0000855 (LandPlants) Phylogenetic Tree(s): OG_05_0000855_tree ,
OG_06_0000604 (SeedPlants) Phylogenetic Tree(s): OG_06_0000604_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005030_P001
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00166780 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.01 Archaeplastida
AMTR_s00035p00052900 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.04 Archaeplastida
AMTR_s00092p00049320 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
AT4G21120 AAT1, CAT1 amino acid transporter 1 0.04 Archaeplastida
AT5G04770 ATCAT6, CAT6 cationic amino acid transporter 6 0.01 Archaeplastida
GSVIVT01012155001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
GSVIVT01021609001 No alias Solute transport.carrier-mediated transport.APC... 0.05 Archaeplastida
LOC_Os01g11160.1 No alias cationic amino acid transporter (CAT) 0.06 Archaeplastida
LOC_Os03g43970.1 No alias cationic amino acid transporter (CAT) 0.07 Archaeplastida
Mp5g21920.1 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Pp3c5_24930V3.1 No alias cationic amino acid transporter 6 0.03 Archaeplastida
Solyc02g070280.3.1 No alias cationic amino acid transporter (CAT) 0.04 Archaeplastida
Solyc08g077810.2.1 No alias Cationic amino acid transporter 6, chloroplastic... 0.03 Archaeplastida
Solyc11g006710.2.1 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida
Zm00001e018123_P001 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
Zm00001e024163_P002 No alias cationic amino acid transporter (CAT) 0.02 Archaeplastida
Zm00001e030690_P001 No alias cationic amino acid transporter (CAT) 0.05 Archaeplastida
Zm00001e039396_P004 No alias cationic amino acid transporter (CAT) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR029485 CAT_C 519 569
IPR002293 AA/rel_permease1 80 495
No external refs found!