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  5. Zm00001e005157_P001

Zm00001e005157_P001


Description : RING-HC-class E3 ligase


Gene families : OG0000808 (Archaeplastida) Phylogenetic Tree(s): OG0000808_tree ,
OG_05_0000622 (LandPlants) Phylogenetic Tree(s): OG_05_0000622_tree ,
OG_06_0001983 (SeedPlants) Phylogenetic Tree(s): OG_06_0001983_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005157_P001
Cluster HCCA: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00165910 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00048p00164020 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01014361001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os02g42690.3 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
LOC_Os04g44820.1 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
LOC_Os12g43930.1 No alias RING-HC-class E3 ligase 0.03 Archaeplastida
Smo402081 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005666 RNA polymerase III complex IEP Neighborhood
BP GO:0006383 transcription by RNA polymerase III IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!