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  5. Zm00001e005536_P001

Zm00001e005536_P001


Description : component alpha-Tubulin of alpha-beta-Tubulin heterodimer


Gene families : OG0000426 (Archaeplastida) Phylogenetic Tree(s): OG0000426_tree ,
OG_05_0000313 (LandPlants) Phylogenetic Tree(s): OG_05_0000313_tree ,
OG_06_0000596 (SeedPlants) Phylogenetic Tree(s): OG_06_0000596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005536_P001
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00112490 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
AT1G04820 TOR2, TUA4 tubulin alpha-4 chain 0.03 Archaeplastida
AT1G50010 TUA2 tubulin alpha-2 chain 0.04 Archaeplastida
AT1G64740 TUA1 alpha-1 tubulin 0.02 Archaeplastida
AT4G14960 TUA6 Tubulin/FtsZ family protein 0.03 Archaeplastida
AT5G19770 TUA3 tubulin alpha-3 0.02 Archaeplastida
AT5G19780 TUA5 tubulin alpha-5 0.06 Archaeplastida
Cpa|evm.model.tig00000237.34 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 Archaeplastida
Cpa|evm.model.tig00000404.34 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 Archaeplastida
Cre03.g190950 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 Archaeplastida
Cre04.g216850 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 Archaeplastida
GSVIVT01009258001 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
GSVIVT01025462001 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 Archaeplastida
LOC_Os03g51600.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Mp1g24530.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Mp2g23500.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Pp3c25_1010V3.1 No alias tubulin alpha-5 0.02 Archaeplastida
Smo100162 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003714 transcription corepressor activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 213
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
No external refs found!