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Description : BEST Arabidopsis thaliana protein match is: Frigida-like protein (TAIR:AT5G27220.1); Has 43637 Blast hits to 24906 proteins in 1566 species: Archae - 743; Bacteria - 4122; Metazoa - 22377; Fungi - 2585; Plants - 1803; Viruses - 158; Other Eukaryotes - 11849 (source: NCBI BLink).
Gene families : OG0046885 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0046650 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0041312 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G12190 | |
| Cluster | HCCA: Cluster_27 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005886 | plasma membrane | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0004150 | dihydroneopterin aldolase activity | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Neighborhood |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0008327 | methyl-CpG binding | IEP | Neighborhood |
| BP | GO:0009559 | embryo sac central cell differentiation | IEP | Neighborhood |
| MF | GO:0015386 | potassium:proton antiporter activity | IEP | Neighborhood |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Neighborhood |
| MF | GO:0022821 | potassium ion antiporter activity | IEP | Neighborhood |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Neighborhood |
| CC | GO:0043076 | megasporocyte nucleus | IEP | Neighborhood |
| CC | GO:0043078 | polar nucleus | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |