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  5. Zm00001e005932_P001

Zm00001e005932_P001


Description : fasciclin-type arabinogalactan protein


Gene families : OG0003199 (Archaeplastida) Phylogenetic Tree(s): OG0003199_tree ,
OG_05_0002654 (LandPlants) Phylogenetic Tree(s): OG_05_0002654_tree ,
OG_06_0002436 (SeedPlants) Phylogenetic Tree(s): OG_06_0002436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e005932_P001
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00159330 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
AT2G35860 FLA16 FASCICLIN-like arabinogalactan protein 16 precursor 0.1 Archaeplastida
AT3G11700 FLA18 FASCICLIN-like arabinogalactan protein 18 precursor 0.05 Archaeplastida
AT3G52370 FLA15 FASCICLIN-like arabinogalactan protein 15 precursor 0.05 Archaeplastida
AT5G06390 FLA17 FASCICLIN-like arabinogalactan protein 17 precursor 0.07 Archaeplastida
GSVIVT01022545001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.12 Archaeplastida
GSVIVT01022548001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Gb_31981 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
Gb_37149 No alias fasciclin-type arabinogalactan protein 0.09 Archaeplastida
Gb_40445 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os03g57460.1 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
LOC_Os07g06680.1 No alias fasciclin-type arabinogalactan protein 0.18 Archaeplastida
MA_28601g0010 No alias Fasciclin-like arabinogalactan protein 17 OS=Arabidopsis... 0.03 Archaeplastida
MA_28601g0020 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
MA_43595g0010 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
Pp3c16_8540V3.1 No alias FASCICLIN-like arabinogalactan protein 17 precursor 0.03 Archaeplastida
Pp3c25_5850V3.1 No alias FASCICLIN-like arabinogalactan protein 17 precursor 0.04 Archaeplastida
Smo54466 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.09 Archaeplastida
Solyc10g081720.2.1 No alias fasciclin-type arabinogalactan protein 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 61 184
IPR000782 FAS1_domain 301 409
No external refs found!