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  5. Zm00001e006162_P003

Zm00001e006162_P003


Description : no hits & (original description: none)


Gene families : OG0003972 (Archaeplastida) Phylogenetic Tree(s): OG0003972_tree ,
OG_05_0003047 (LandPlants) Phylogenetic Tree(s): OG_05_0003047_tree ,
OG_06_0003288 (SeedPlants) Phylogenetic Tree(s): OG_06_0003288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e006162_P003
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00166420 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.12 Archaeplastida
AT4G39420 No alias unknown protein; Has 46 Blast hits to 40 proteins in 10... 0.15 Archaeplastida
GSVIVT01022255001 No alias No description available 0.08 Archaeplastida
GSVIVT01022256001 No alias No description available 0.03 Archaeplastida
GSVIVT01022257001 No alias No description available 0.04 Archaeplastida
LOC_Os01g08750.2 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_25504g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_280504g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_32474g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_646g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
MA_693456g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp4g01220.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c10_13600V3.1 No alias No annotation 0.05 Archaeplastida
Pp3c3_30110V3.1 No alias No annotation 0.06 Archaeplastida
Pp3c7_14700V3.1 No alias No annotation 0.07 Archaeplastida
Solyc04g051570.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR028107 Spatacsin_C_dom 2718 3009
No external refs found!