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Description : no hits & (original description: none)
Gene families : OG0012190 (Archaeplastida) Phylogenetic Tree(s): OG0012190_tree ,
OG_05_0012125 (LandPlants) Phylogenetic Tree(s): OG_05_0012125_tree ,
OG_06_0010182 (SeedPlants) Phylogenetic Tree(s): OG_06_0010182_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e006401_P001 | |
| Cluster | HCCA: Cluster_6 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os06g30420.1 | No alias | Pentatricopeptide repeat-containing protein At4g20090... | 0.08 | Archaeplastida | |
| Solyc02g081860.3.1 | No alias | Pentatricopeptide repeat-containing protein At4g20090... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Neighborhood |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| CC | GO:0005730 | nucleolus | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006177 | GMP biosynthetic process | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Neighborhood |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Neighborhood |
| BP | GO:0009163 | nucleoside biosynthetic process | IEP | Neighborhood |
| BP | GO:0009451 | RNA modification | IEP | Neighborhood |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Neighborhood |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
| CC | GO:0030684 | preribosome | IEP | Neighborhood |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | Neighborhood |
| CC | GO:0033588 | Elongator holoenzyme complex | IEP | Neighborhood |
| BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
| BP | GO:0042278 | purine nucleoside metabolic process | IEP | Neighborhood |
| BP | GO:0042451 | purine nucleoside biosynthetic process | IEP | Neighborhood |
| BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0046037 | GMP metabolic process | IEP | Neighborhood |
| BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Neighborhood |
| BP | GO:0046129 | purine ribonucleoside biosynthetic process | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:1901070 | guanosine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Neighborhood |
| BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |