1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G12790

AT1G12790


Description : CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0009066 (Archaeplastida) Phylogenetic Tree(s): OG0009066_tree ,
OG_05_0008834 (LandPlants) Phylogenetic Tree(s): OG_05_0008834_tree ,
OG_06_0010750 (SeedPlants) Phylogenetic Tree(s): OG_06_0010750_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12790
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
Solyc06g064560.4.1 No alias component PTD of SHOC1-PTD heterodimer 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
CC GO:0000139 Golgi membrane IEP Neighborhood
BP GO:0003002 regionalization IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003826 alpha-ketoacid dehydrogenase activity IEP Neighborhood
MF GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity IEP Neighborhood
MF GO:0003978 UDP-glucose 4-epimerase activity IEP Neighborhood
MF GO:0004028 3-chloroallyl aldehyde dehydrogenase activity IEP Neighborhood
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0004075 biotin carboxylase activity IEP Neighborhood
MF GO:0004084 branched-chain-amino-acid transaminase activity IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004147 dihydrolipoamide branched chain acyltransferase activity IEP Neighborhood
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Neighborhood
MF GO:0004485 methylcrotonoyl-CoA carboxylase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004679 AMP-activated protein kinase activity IEP Neighborhood
MF GO:0004738 pyruvate dehydrogenase activity IEP Neighborhood
MF GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity IEP Neighborhood
MF GO:0004805 trehalose-phosphatase activity IEP Neighborhood
MF GO:0004930 G-protein coupled receptor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005615 extracellular space IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005740 mitochondrial envelope IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006012 galactose metabolic process IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006498 N-terminal protein lipidation IEP Neighborhood
BP GO:0006499 N-terminal protein myristoylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006528 asparagine metabolic process IEP Neighborhood
BP GO:0006529 asparagine biosynthetic process IEP Neighborhood
BP GO:0006551 leucine metabolic process IEP Neighborhood
BP GO:0006552 leucine catabolic process IEP Neighborhood
BP GO:0006625 protein targeting to peroxisome IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
BP GO:0007154 cell communication IEP Neighborhood
BP GO:0007568 aging IEP Neighborhood
MF GO:0008020 G-protein coupled photoreceptor activity IEP Neighborhood
MF GO:0009045 xylose isomerase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009083 branched-chain amino acid catabolic process IEP Neighborhood
BP GO:0009267 cellular response to starvation IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009638 phototropism IEP Neighborhood
BP GO:0009642 response to light intensity IEP Neighborhood
BP GO:0009646 response to absence of light IEP Neighborhood
BP GO:0009648 photoperiodism IEP Neighborhood
BP GO:0009741 response to brassinosteroid IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009744 response to sucrose IEP Neighborhood
BP GO:0009746 response to hexose IEP Neighborhood
BP GO:0009750 response to fructose IEP Neighborhood
BP GO:0009838 abscission IEP Neighborhood
MF GO:0009881 photoreceptor activity IEP Neighborhood
MF GO:0009883 red or far-red light photoreceptor activity IEP Neighborhood
BP GO:0009954 proximal/distal pattern formation IEP Neighborhood
BP GO:0009991 response to extracellular stimulus IEP Neighborhood
BP GO:0010016 shoot system morphogenesis IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010114 response to red light IEP Neighborhood
BP GO:0010161 red light signaling pathway IEP Neighborhood
BP GO:0010201 response to continuous far red light stimulus by the high-irradiance response system IEP Neighborhood
BP GO:0010203 response to very low fluence red light stimulus IEP Neighborhood
BP GO:0010227 floral organ abscission IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
BP GO:0015908 fatty acid transport IEP Neighborhood
BP GO:0015919 peroxisomal membrane transport IEP Neighborhood
BP GO:0015976 carbon utilization IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016417 S-acyltransferase activity IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
BP GO:0016558 protein import into peroxisome matrix IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0018377 protein myristoylation IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
MF GO:0030523 dihydrolipoamide S-acyltransferase activity IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
MF GO:0031516 far-red light photoreceptor activity IEP Neighborhood
BP GO:0031667 response to nutrient levels IEP Neighborhood
BP GO:0031668 cellular response to extracellular stimulus IEP Neighborhood
BP GO:0031669 cellular response to nutrient levels IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034284 response to monosaccharide IEP Neighborhood
BP GO:0034285 response to disaccharide IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042594 response to starvation IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0043574 peroxisomal transport IEP Neighborhood
BP GO:0043617 cellular response to sucrose starvation IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Neighborhood
BP GO:0046369 galactose biosynthetic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048439 flower morphogenesis IEP Neighborhood
BP GO:0048573 photoperiodism, flowering IEP Neighborhood
MF GO:0050373 UDP-arabinose 4-epimerase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0050897 cobalt ion binding IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0055122 response to very low light intensity stimulus IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0065002 intracellular protein transmembrane transport IEP Neighborhood
BP GO:0071491 cellular response to red light IEP Neighborhood
BP GO:0071496 cellular response to external stimulus IEP Neighborhood
BP GO:0071806 protein transmembrane transport IEP Neighborhood
BP GO:0072662 protein localization to peroxisome IEP Neighborhood
BP GO:0072663 establishment of protein localization to peroxisome IEP Neighborhood
BP GO:0090342 regulation of cell aging IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!